Lactobacillus amylovorus GRL1118: LAB52_08260
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Entry
LAB52_08260 CDS
T01954
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03030
DNA replication
lay03430
Mismatch repair
lay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAB52_08260
03430 Mismatch repair
LAB52_08260
03440 Homologous recombination
LAB52_08260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lay03032
]
LAB52_08260
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_08260
Enzymes [BR:
lay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAB52_08260
DNA replication proteins [BR:
lay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAB52_08260
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAB52_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
BRCT
DNA_pol_B_exo1
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AEA32569
LinkDB
All DBs
Position
complement(1620721..1621677)
Genome browser
AA seq
318 aa
AA seq
DB search
MSIYVKNGILHVPGAQDKLRQKGQEIPDFLSNYTMLDIETTGLSPYRDRITELGAVKVRN
GQIVDQYTNLIKFPKNNKVPAFITKLNGITEEQIVNEGIPAEQAIKEFREFIDDDIIIGY
NVNFDLNFLYDLSQKYKLPILNNDYVDVLRLARAYYPRERHNRLIDCMQRAGIAQVEEHH
GLADSLDTIKVYNDFSAHFTDDLLEATRNKIKNVDLTGDDVDYIDLGFRNPVQNKNIVLS
GHIHMDEQDADKMIGNMGGKVEDKVNPMTNYLIMGDHDFFRKDNEDLNTARDLIKDGAKI
KRLSESFFLGMLDDWARS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttacgtaaaaaacgggattctgcatgttcccggtgcccaagataagttgcgg
caaaaagggcaagaaatacctgactttttgtctaattacaccatgctggatattgaaacg
actggcctgagtccatacagagaccgcattacagaacttggtgcagtgaaggtcagaaac
ggccaaatcgttgaccaatatactaatttgatcaagttccctaagaacaataaggtgcct
gcttttattaccaaattgaatggcattactgaagaacaaatcgttaatgaggggattcct
gctgaacaagcgattaaggaattccgtgagttcatcgatgacgacattatcattggttat
aacgtcaactttgatctgaactttttatatgatttaagtcaaaagtacaagttgccaatc
ttaaataatgattacgtcgatgtgttacgcttagccagagcgtactatccacgcgaacgc
cacaatcgtttgattgactgcatgcagcgtgctggtatcgcgcaagtagaggagcaccac
ggtttagccgactcgcttgatacgatcaaggtctataacgactttagtgcgcacttcacc
gatgatttgcttgaagcgacacgtaacaagatcaagaacgttgatttaactggcgacgat
gtcgattacattgatctcggttttagaaatccggtccaaaataaaaacatcgttttatca
ggtcacattcatatggatgaacaagacgccgacaagatgattggcaacatgggtggtaag
gtcgaagataaggttaacccaatgaccaattatctgattatgggtgaccatgatttcttt
agaaaagacaacgaagatttgaatacagcacgtgatttgattaaagatggtgccaagatt
aagcgtttgtcagaaagcttctttttagggatgcttgatgactgggcacgaagttag
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