Lelliottia amnigena: A8A57_00660
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Entry
A8A57_00660 CDS
T04400
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
laz
Lelliottia amnigena
Pathway
laz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A8A57_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laz03400
]
A8A57_00660
Enzymes [BR:
laz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A8A57_00660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A8A57_00660
DNA repair and recombination proteins [BR:
laz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A8A57_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANG90981
LinkDB
All DBs
Position
140390..141199
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAIVRNGRLRWPVSDEIHALSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILTEELPAAKHDHVDLVLSNGKVLRYTDPRRFGAWLWTKEL
AGHNVLAHLGPEPLSEAFDATYLKAQCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLALSLSDAECELLVKVIKAVLQRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRVCGTPIVATKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagagaccagccgccgcggtatcgagccgcatctggtcggc
gcaacgattctgcatgccattgtgcgtaacggccgtctccgttggcccgtttctgatgag
atacatgcattaagcgataaaccggtgctgagcgtacagcgtcgcgccaaatacctgctg
ctggagctgcctgacggctggattatcatccacctggggatgtccggcagcctgcgcatc
ctgacggaagagttgcctgcggcaaaacacgaccacgtggatttagtgctgagcaacggc
aaagtgctgcgttatacggatcctcgccgctttggcgcgtggttatggaccaaagagctt
gccggccataacgtgctggcccatcttgggccagagccgctaagcgaggcgtttgacgcc
acctacttgaaagcacagtgcgcgaagaagaaaacggcgatcaaaccctggctgatggat
aacaagctggtggtgggcgtagggaatatctacgccagcgaatcgctgtttgccgccggg
atccatcccgatcggcttgcgctttccctgtcggacgccgagtgcgaattgctggtcaag
gtcattaaggcggtgttgcagcgctcgattgagcagggtggcacgacgctgaaagacttc
ctgcaaagtgacggtaagccaggttattttgcgcaggaactacaggtctatgggcgtaaa
ggcgagccgtgcagagtctgcggcacaccgattgtggcgacgaagcacgcgcagcgcgcc
accttctattgccgccagtgtcagaaataa
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