Lelliottia amnigena: A8A57_04105
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Entry
A8A57_04105 CDS
T04400
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
laz
Lelliottia amnigena
Pathway
laz03030
DNA replication
laz03430
Mismatch repair
laz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A8A57_04105
03430 Mismatch repair
A8A57_04105
03440 Homologous recombination
A8A57_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laz03032
]
A8A57_04105
03400 DNA repair and recombination proteins [BR:
laz03400
]
A8A57_04105
Enzymes [BR:
laz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A8A57_04105
DNA replication proteins [BR:
laz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A8A57_04105
DNA repair and recombination proteins [BR:
laz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A8A57_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ANG91623
LinkDB
All DBs
Position
894556..898038
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GLKPIIGADFHVQSELFGDEMTQLSVLAMNNTGYQNLTLLISKAYQRGYGAQGPWIDREW
LAELNEGLLLISGGRMGDVGRSLLRGNSVLVDQCLDFYQQHFADRFYLELIRTGRADEEN
YLHAAVALAEARGVPVVATNDVRFIDADDFDAHEIRVAIHDGFTLDDPKRPRLYSSQQYM
RSEDEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EDRLAFLFPDEAVRKEKRPPYDERLDVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGAFEEGAKKNGIDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCLPWPEHTVLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTEALEKYQHLLENDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgattgatggg
ctggcgaagaccgggccgctggttaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgatttcactaacctgtgcggtttggttaagttctacggaacggcgcatggcgcg
ggcttaaagccaattattggtgccgattttcatgtccagagcgagctgttcggcgatgaa
atgacgcaactctccgtgctggccatgaacaacacgggttatcagaatctcactctgttg
atctctaaagcctatcagcgcggctatggggcgcaagggccgtggatcgaccgggaatgg
ctggcggagttaaacgaagggctgctgttaatctctggtggccgcatgggtgacgtcggc
aggagtttgctgcgcggcaatagcgtactcgttgaccagtgtcttgatttttatcagcag
cattttgccgatcgtttttatctggagctgattcgcaccggtcgtgcggatgaagaaaac
tatctccatgccgccgttgcgctggcagaagcgcgcggcgtgcccgttgtggcaaccaac
gatgtgcgcttcattgacgctgatgactttgatgcccatgaaattcgcgtggccatccac
gatggttttacgctcgacgatccgaaacgcccacgcttgtactcatcgcagcaatacatg
cgcagcgaagatgagatgtgcgagctgttcgccgatattccggaagcgctggaaaacagc
gttgagattgccaaacgctgcaacgtaacggtgcgactgggcgaatatttcctgccgcag
ttcccgacaggcgatatgaccaccgaagatttcctggttgtgaaatcgaaagaaggtctg
gaagatcgtctggcgttcttgttccctgatgaagcggtccgcaaagagaaacgtccgcct
tacgacgaacgtctggacgtggagctcaaggtgattaaccagatgggcttcccgggctac
ttcttgatcgtaatggaatttatccagtggtcgaaagataacggcgtaccggtaggtcca
ggccgtggttccggtgcaggatcgctggtggcgtatgcgctgaaaatcaccgatctcgat
ccgctggaattcgatctgctgttcgaacgcttcctgaacccggaacgtgtttccatgcct
gactttgacgtcgacttctgcatggagaaacgcgaccaggttatcgatcacgtggccgag
atgtacggccgtgatgcggtttcacagattatcactttcggtacgatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctgggtcatccgtacggtttcgtcgatcgtatctca
aaactggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagccgagccgcag
ttacctgaaatctacgaagcggatgaagaggtcagggcgctgatcgacatggcgcgtaag
ctggaaggcgttacgcgcaatgccggtaaacacgccggtggtgtggttattgcgcccact
aaaattaccgattttgccccgctgtattgcgatgaagcgggccagcatccggtcacccag
tttgataaaaatgacgttgaatacgcgggtctggtgaagtttgacttccttggcttgcgc
acgctcaccatcatcgactgggcgttgaagatgatcaacccgcgtcgggcgaagcagggc
ctggagccgattgatatcgccgcgattccgctggatgacaagaaaagctttgatatgctg
cagcgctcggaaaccaccgcggtcttccagcttgaatcccgcggcatgaaagatctgatc
aaacgtcttcagcctgactgcttcgaagatatgatcgccctggtggccctgttccgtccg
gggcccttacagtcgggcatggtggataactttatcgaccgtaagcacgggcgcgaagag
atctcttatcctgatgtgcagtggcagcatgaatgtctgaaaccggtactggagccaacc
tacggtattatcctgtatcaggaacaggtcatgcagattgcccaggagctctccggctat
acccttggcggtgcagatatgctgcgtcgtgcgatgggtaagaaaaaaccggaagagatg
gcgaagcagcgcggggcctttgaagagggcgcgaaaaagaacggcattgatggcgaactg
gcggttaaaatcttcgatctggtagagaaatttgccggatacggatttaacaaatcgcac
tccgcagcctatgcgctggtctcttaccagacgctgtggcttaaggcgcactatccggca
gaatttatggcggcggtaatgaccgccgatatggataacaccgagaaggtggtaggcctg
gtcgatgaatgctggcgaatggggctcaaaatcctgccgcccgatatcaactccggtcag
tatcatttccatgtgaatgatgacggggagattgtctatgggatcggcgcgatcaaaggg
gtcggagaaggtccgatcgaagcgatcatcgaggcgcgtaataacggcggctatttccgc
gagttattcgatctttgtgcgcgtaccgacaccaaaaagctgaaccgtcgcgtgctggaa
aaactgatcatgtccggggcattcgacaggctggggccgcaccgcgccgcgctgatgaac
tccctgggcgatgcgctgaaggcggcagatcagcacgcgaaagcagaagcgatagggcag
gcagatatgttcggtgttctggcggaggagccagagcaaatagaacagtcctacgctaac
tgtctgccatggccggaacataccgtgctggaaggggagcgtgaaacgttagggttatat
ctgacgggccaccctatcaaccagtacctgaaagaaattgagcgctatgtcggcggctat
cggcttaaagacatgcatccgactgaacgtggtaaaatcaccacggcggcggggctcgtc
attgctgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccggacggctggaggtgatgttattcaccgaagcgctggaaaaataccagcat
ttgctggaaaacgaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggtgggcttaaaatgatggcccgtgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccatcgctcggggaccattccagtacatctctactatcag
agggcggatgcacgtgcgcgattgcgctttggcgcaacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgtggccttattggttcggagcaggtggaactggagtttgac
taa
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