Lelliottia amnigena: A8A57_06800
Help
Entry
A8A57_06800 CDS
T04400
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
laz
Lelliottia amnigena
Pathway
laz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A8A57_06800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laz03400
]
A8A57_06800
DNA repair and recombination proteins [BR:
laz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A8A57_06800
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A8A57_06800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
SBDS_domain_II
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANG92120
LinkDB
All DBs
Position
1468916..1470931
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMIIDQRAILRRLTELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDMALRVELFDEEVERLSLFDPLTGHVESTIQR
FTVYPKTHYVTPRERIVQAMEDIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGDEIIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRARVSINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMAKAISETERRREKQQQYNEEHGITPQGLNKKVVDILALG
QNIAKTKTKGRGKSRSPVEADTVVLTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRDLFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattctgccttccgtccttctggcgaccagccagaggcc
attcgtcgcctgaaagaggggctggaagatgggctggcgcatcaaacgctgctaggcgta
acggggtcaggtaaaacctttacggtggcgaacgtgattgcggatctccagcgtcccacc
atggtgctggcgccaaataaaacgctggcggcacagctgtacggcgagatgaaggagttt
ttcccggacaacgcggtggaatacttcgtctcctattacgattattaccagcctgaggcg
tatgtccctagctccgacacctttatcgaaaaagatgcctcggtgaacgagcatatcgaa
cagatgcgactgtcggcgaccaaagcgctcctggagcggcgggacgttgtcgtggtggcg
tccgtttcggcgatctacggtctgggcgatcccgatctgtacctgaagatgatgctgcac
cttactcaggggatgatcatcgatcagcgggcgattttacgccgtctgaccgagctgcag
tacacccgcaacgatcaggcgttccagcgggggacgttccgcgtgcggggcgaagtgatc
gacatcttcccggccgagtcggacgacatggcgctgcgcgttgagctgtttgacgaagag
gtcgaacgtctgtcgttattcgatccgttgaccggacacgttgaatccaccattcagcgc
tttaccgtctatccaaaaacccactatgtcaccccgcgcgagcgtatcgtgcaggcgatg
gaagacattaaggtcgagctggccgagcgtcgtaaagtgctgcttgagaataacaaattg
ctcgaagagcaacgactgagccagcgcacccagttcgatttagagatgatgaacgagctg
ggctactgctcaggcattgagaactactcgcgttatctgtccgggcgcgggccaggcgaa
gcgccgcctacgctgtttgactatttgcctgctgacggactgcttgttgtggacgaatcc
cacgtcaccatcccgcagatcggcgggatgtatcgcggtgaccgggcgcgtaaagagact
ctggttgaatacggtttccgcctgccgtcggcgctggataaccgcccgatgaagtttgaa
gagtttgaggcgcttgccccgcaaaccatttacgtttctgccacgccggggaactacgaa
ctggagaaatccggggatgagatcatcgatcaggtggtgcgtccgaccggcctgctggat
ccattaattgaggtccgtccggtggccacccaggttgacgatctgctttctgagattcgt
gcccgagtttccattaacgagcgcgtgctggtgaccacactcaccaaacgtatggcggaa
gatctcaccgaatatcttgaagagcatggcgagcgcgtgcgctatctgcactccgatatt
gatacggtcgagcgtatggaaatcatccgcgatttacgccttggcgagttcgatgtgctg
gtggggatcaacctgttgcgagaagggctggatatgccggaggtctctctggtggcgatc
cttgacgcggataaagagggcttcctgcgttccgagcgttcgctgattcagaccattggt
cgtgccgcgcgtaacatcaacggcaaagcgattctctacggcgacaaaatcaccgcctcg
atggccaaagccatcagcgaaaccgagcgtcgtcgtgagaagcagcagcagtacaacgaa
gaacacggtatcacgccgcaggggctgaacaagaaagtggtggatattctcgcgctgggt
cagaatattgcgaagaccaagacgaaaggccgcggtaagtctcgttcaccggttgaggcc
gataccgttgttctgacgccaaaagcgctccagcagaaaatccacgaactggaagggcag
atgatgcaacacgcgcagaaccttgagtttgaagaggccgcgcagatccgcgaccagctg
catcaactgcgggatctgtttatcgccgcatcttaa
DBGET
integrated database retrieval system
