Lelliottia amnigena: A8A57_18640
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Entry
A8A57_18640 CDS
T04400
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
laz
Lelliottia amnigena
Pathway
laz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8A57_18640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laz03019
]
A8A57_18640
03016 Transfer RNA biogenesis [BR:
laz03016
]
A8A57_18640
Enzymes [BR:
laz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A8A57_18640
Messenger RNA biogenesis [BR:
laz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A8A57_18640
Transfer RNA biogenesis [BR:
laz03016
]
Prokaryotic type
tRNA degradation factors
A8A57_18640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
aRib
KH_2
Spt6_S1
DUF4172
Motif
Other DBs
NCBI-ProteinID:
ANG94316
LinkDB
All DBs
Position
complement(4022938..4025070)
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNIKDLVNEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQIDAIKSETIATLVAEDESLDANELSEILHAI
EKNAVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGDRTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSPAAAPEAPAAEQGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcagcataccgtcaccctggaaacc
ggcatgatggcgcgtcaggcgaccgctgccgtaatggtaagcatggatgacaccgccgta
ttcgtgaccgttgttggccagaagaaagctaaaccaggtcaggacttcttcccgctgacc
gtcaactaccaggagcgtacttacgctgccggtaaaatcccgggtggcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgcgaccgttgtttccgtt
aacccacaggttaacccggacatcgtggcaatgatcggcgcatctgctgcgctgtctctg
tctggtattccgttcaacggtcctatcggttctgctcgtgttggctacattaacgaccag
tacgttctgaacccaacgcaggatgagctcaaagagagcaagctggacctggttgttgcc
ggtaccgaagccgccgttctgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggcgctgtggtctttggccatgagcagcagcaggttgttatccagaacatcaaa
gatctggttaacgaagcgggtaaaccacgctgggactggcagcctgaagccgtaaacgaa
gcgctgaacgcgcgcgttgctgccctggctgaagcacgtctgagcgatgcttaccgcatc
accgacaagcaagaacgttacgcacagattgacgcaatcaaatctgaaaccatcgcaacg
ctggtagcagaagacgagtctctggacgcgaacgaactgagcgaaatcctgcacgctatc
gagaaaaatgctgttcgtagccgcgttctggcaggcgagccgcgtatcgatggccgtgaa
aaagacatgatccgtggtctggatgtgcgtactggcgttctgccacgtactcacggctct
gcactgttcacccgtggcgaaacgcaggcgctggttaccgcgaccctgggtaccgcacgt
gatgcgcagaacattgacgaactgatgggcgatcgcaccgacagcttcctgttccactat
aacttccctccgtactccgtaggtgaaaccggtatggttggctcgcctaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgtggcgtactggcagtgatgccggaagcagacaaa
ttcccgtacaccgttcgtgtggtgtctgaaatcaccgaatccaacggttcttcttcaatg
gcttccgtgtgtggcgcatctctggcgctgatggatgcaggcgtgccgatcaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactatgttgtactgtctgac
attctgggcgacgaagatcacctgggcgatatggacttcaaagtagcgggttcccgcgaa
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcacgtctgcacatcctgggcgtgatggaacaggcg
attaacgcgccacgtggcgacatttctcagttcgctccacgtatccacaccattaagatc
agcccggacaaaatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcacaaccatcgaaatcgaagatgacggtactgtgaagatcgcagcgacc
gacggcgaaaaagcgaaattcgcgattcgtcgtatcgaagagatcaccgcagaaatcgaa
gtaggccgtatctacagcggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtctggttcacatctctcagatcgctgacaagcgcgttgag
aaagtgaccgattacctgcagatgggtcaggaagttccggttaaagttctggaagttgac
cgccagggccgcatccgtctgagcattaaagaagccaccgagcagtctcctgccgcagcg
ccagaagcgccagctgcagaacaaggcgagtaa
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