Lelliottia amnigena: A8A57_19165
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Entry
A8A57_19165 CDS
T04400
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
laz
Lelliottia amnigena
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laz03019
]
A8A57_19165
Messenger RNA biogenesis [BR:
laz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8A57_19165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
ANG94415
LinkDB
All DBs
Position
complement(4132935..4134875)
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTGLTILVTLIGCSLSFYNAIQDKLNNRVESVASVIDARLVTSTLPA
IEQQLDELMVPVDIVQIDILQGSKVILSHSHQSSYRPAGTLEQYRTVTVESIKSPGITLR
LSYQDPMANYFRSLMTTAPLTAAVAFIVILLFLAVRWLRRQLSGQELLENRSLRILNGER
GINVRGSVHEWPTRTSSALDVLLSEIQFASEQRSRMDTLIRSYAAQDNKTGLNNRLFFNN
QLATLLDDPEKVGSHGVVMMIRLPDFDLLRDTWGRKVAEDHLFTLINLLSTFVMRYPGAL
LARYHRSDFTVLLPHRTLKESESIASQLLKAVDALPPSKMLDRDDMVHIGICAWRGGQHT
QQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
LRNGVVHHRELMCRIFDGKEEVVLAEFLPMVLQFGLSEEYDRQQITRLIPFLSFWPEENL
ALQVTVESLIRPRFQRWLRDALMQCEKSQRKRIIFELAEADVGQHISRLQPVVRLMNALG
VRVAVTQAGLTLVSTLWIKELDVELLKLHPGLIRDIEKRTENQLLVQSLVEACKGTRTQV
FATGVRSRSEWQMLTERGVAGGQGDFIASSQALDSNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttatcaccttgctcacggggctcactatcctt
gtgacgctcatcggatgctcgctgagtttttacaatgcgattcaggataagctgaataat
cgtgtcgaatccgtcgcctcggtcattgacgccaggctggtaacatcaaccttgcccgcg
attgagcaacagctggatgagctgatggtcccggtggatattgttcagatcgacatctta
cagggtagcaaagtcattctgagccattcccatcagagcagctatcgcccggcaggcacc
ctcgagcagtaccgcacagtgacggtggaatcgattaaaagcccgggcatcactctccgg
ctatcttaccaggatcccatggcgaactactttcgctcgctgatgaccaccgcccccctg
accgccgccgttgcctttatcgtcattttactgttcctggccgttcgctggcttcgtcgg
cagctttccgggcaagagctgctggaaaatcgatccttacgcattcttaacggggagcgc
ggcattaacgtgcggggatcggtccatgagtggccgacgcgcacgagcagcgcgctggat
gtgctgctctcagaaatccagttcgccagcgagcagcgtagccggatggataccctgatc
cgctcctatgccgcgcaggataataaaacggggctgaacaacaggctcttttttaataac
caactggcgacgctgctcgacgatccggaaaaagtgggatcgcatggcgtggtgatgatg
attcgccttccggatttcgacctcctgcgcgatacctggggacgcaaagtagccgaagat
catctctttacgttgatcaatcttctctcgacctttgtgatgcgctatcccggcgcgctg
ctggcgcggtatcaccgcagcgattttacggttctgttgccgcatcgcaccttaaaggag
tcggaaagtattgccagccagctccttaaggccgttgatgccttgcccccttctaaaatg
ctcgaccgggacgatatggtgcacatcggtatttgcgcctggcgaggaggccagcacact
cagcaggtgatggagcatgccgaggcggccacgcgcaacgccgtgctgcagggcgctaac
ggttgggcggtctatgacgactctctgcctgagaaaggacggggtaacgtgcgctggcgt
acgctcattgaacagatgctcagtcgcggtggccccaggatttatcaaaagcctgctgta
ttacgtaatggcgtcgtccatcatcgcgaactgatgtgccggatctttgacggtaaagaa
gaggtggtgttagcggaatttctgcccatggttctgcagtttggcctctcggaagagtat
gaccgtcaacaaattacgcgtctgattccatttttatctttctggccggaggaaaatctg
gcattacaggtgacggtagagtcgcttattcgcccgcgttttcagcgctggctgcgcgat
gcgttaatgcaatgcgaaaaatcgcaacgcaagcggattatttttgaacttgcagaggcg
gatgttggtcaacatatcagccggttacagcctgtggttcgattaatgaatgcgctcggc
gttcgcgtcgcagtgacacaggcgggtttaaccctggtcagtacgctctggatcaaagaa
ctggatgtggaattattgaagttacatcccgggcttatcagggatattgagaagcgcacc
gaaaaccagcttctggtacagagtctggtggaggcgtgtaaaggaacgcgcacgcaggtt
ttcgcgacgggcgtccgctcccgtagcgaatggcagatgctgacggagcgcggtgtggca
ggaggacagggcgattttattgcgtcctctcaggcgcttgacagcaatgtgaaaaaatat
ttgcaaagatactctgtttga
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