Lelliottia amnigena: A8A57_19395
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Entry
A8A57_19395 CDS
T04400
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
laz
Lelliottia amnigena
Pathway
laz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A8A57_19395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laz03021
]
A8A57_19395
03400 DNA repair and recombination proteins [BR:
laz03400
]
A8A57_19395
Enzymes [BR:
laz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A8A57_19395
Transcription machinery [BR:
laz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A8A57_19395
DNA repair and recombination proteins [BR:
laz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A8A57_19395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ANG94451
UniProt:
A0AAP2F2P0
LinkDB
All DBs
Position
complement(4175046..4176035)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgtgcggtgaccgaagttgag
attgatggtgtacttcatgagtacagcaccaaagaaggtgttcaggaggatatcctggaa
atcctgctcaacctgaaagggcttgcggtgagagttcaggggaaagatgaagttatcctt
accttgaataaatctggcattggccctgtgactgcagccgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcacgtgatctgccacctgaccgatgagaacgcagcgatt
agcatgcgtatcaaagttcagcgcggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcatgttacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccatcctggcagaacaactggaagctttcgttgacttacgtgatgtacgtcagcct
gaagtgaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaagcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
accgagattaaagacgtgctggcttcacgtggtctgtctctgggcatgcgcctggaaaac
tggccaccggcaagcattgctgacgagtaa
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