KEGG   Lelliottia amnigena: A8A57_20850
Entry
A8A57_20850       CDS       T04400                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
laz  Lelliottia amnigena
Pathway
laz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:laz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A8A57_20850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:laz03019]
    A8A57_20850
Enzymes [BR:laz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A8A57_20850
Messenger RNA biogenesis [BR:laz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A8A57_20850
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: ANG94725
LinkDB
Position
4466068..4467333
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAMADRKVNQPRALIMAPTRELAVQIHADAEPLAQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPTTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRARSGNGPRRTGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaagtg
atcgaagcccttgaaactaaagggtttcataactgcacgcccatacaggccctcgcactg
ccgcttacgctggctggtcgcgatgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgtttttgacgtcaacgtttcattatttactttctcatccagcaatggctgaccga
aaagttaaccaaccgcgcgcgctgatcatggcgccaacgcgagaacttgcggtgcaaatc
catgctgacgctgagcctctggcacagacgaccggtctgaagctgggtctggcgtatggc
ggcgatggctacgacaaacagcttaaagtgctggaaagcggtgttgatatcctgattggc
accacgggccgtcttatcgattacgccaagcaaaaccatattaaccttggcgccattcag
gttgtcgttctcgatgaagcggaccgtatgtacgatctgggcttcattaaggatatccgc
tggttgttccgtcgtatgcctccgaccacgcagcgtctgaacatgctgttctcggccacg
ctctcttatcgcgtccgcgaactggcgtttgaacaaatgaacaacgctgaatacgttgaa
gttgagccagaacagaaaaccggccaccgtattaaagaagagcttttctacccgtctaac
gaagagaaaatgcgtcttctgcaaacgctcatcgaagaagagtggcccgatcgcgccatc
atcttcgccaataccaagcaccgttgcgaagacatctggggccatctggcagcagacggt
caccgcgtaggtttgctgaccggtgacgtggcacagaagaaacgtctgcggatcctggaa
gagttcacccgtggcgatttagatattctggtcgcaaccgatgtggctgcacgcggcctg
catattcctgccgtgacccacgtattcaactacgatctgcctgacgattgcgaagattac
gtacaccgtattggccgtaccggccgtgccggggcgagcggacactcaatcagtcttgcc
tgtgaagagtatgcgctgaatcttcctgctatcgagacctacattggtcactcgattccg
cagagcaaatacaatccggaagcattgttgagcgaactgccgccacctaagcgactgacc
cgcgcccgctccggcaacggcccgcgtcgtactggcgcaccgcgtaatcgtcgtcgttcc
ggttaa

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