Leptotrichia buccalis: Lebu_1315
Help
Entry
Lebu_1315 CDS
T00975
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lba
Leptotrichia buccalis
Pathway
lba03410
Base excision repair
lba03430
Mismatch repair
lba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lebu_1315
03430 Mismatch repair
Lebu_1315
03440 Homologous recombination
Lebu_1315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lba03400
]
Lebu_1315
DNA repair and recombination proteins [BR:
lba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Lebu_1315
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lebu_1315
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Lebu_1315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACV39203
UniProt:
C7NAM2
LinkDB
All DBs
Position
complement(1395241..1396920)
Genome browser
AA seq
559 aa
AA seq
DB search
MKWEIKNYDEKYLASKSFEFGESKLISRLLLNRGINTKEKVSKFLNSDKKDIHNPFLFEN
MEKVVKRIQQAGENKEKIVVYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGIEI
NKHLVTFLEKREAKLFITVDTSINNREEILMLRNNGIDIIITDHHRQVEVCEEMDILTIN
PKTSKTYPNKFLSGSGVAFKLADAVYERYGANKKILYDYLDIIMIGTVADVVPMTDENRF
IIKKGLNNLKKTKIKGLKYIINYLKINPRNITTSDIGFFIAPIFNALGRIDNSKIVVNFF
IQEDDFKLFSIIEEMKRANKIRRYLENEIYSELEEKIQRLERPKYIFMKSRKWHSGVIGV
VCSRISIKYNIPVILISIKNGYGKASCRSIEGINIFDILKSVSDKLERFGGHDLAAGFLV
SEKYLGEIEKHLRQKLARKNRENVQKTLYVDAWLNIENLNKRKLHEINRLSPFGLDNQEP
NFMDSDVNFFNLTKFGINNRHFKGFVRKNNRIISVIGYNLGHKLKMNNFYKKKFKIVYTP
IFKSVHSDLFIELKIKDFK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggaaataaaaaactatgatgaaaaatatctggcatctaaaagttttgaattt
ggtgaaagtaaattaatttcaagacttcttttgaatcgtggaattaatacaaaagaaaaa
gtttctaaatttttaaattcagataaaaaagatattcataatccatttttatttgaaaat
atggaaaaagttgtgaaaagaatacagcaggctggggaaaacaaggaaaaaatcgtagtt
tatggagattatgacgtagatggaatttctggagtggcatatctagtaataatgttacga
aaattgggactaaatgtggattattatatcccaaatcgtgttcatgaaggaattgagata
aataagcatcttgtgacttttctggaaaaaagggaagcaaaattgtttataacagtcgat
acttcgattaataatcgggaagaaatattaatgttgagaaataacggcattgatataatt
ataacagatcatcatagacaagtcgaagtttgtgaagaaatggatattcttacaataaat
ccaaaaactagtaaaacttatccaaataagtttttgtcaggttcaggagtagcatttaaa
cttgccgacgcagtttatgaaagatatggtgcaaataaaaaaatattatatgattatctg
gatataataatgattgggacggttgcagatgttgtgccgatgacagatgaaaacagattt
attataaaaaaagggttaaataatctaaaaaaaaccaaaataaaaggtttgaagtatatt
attaactatttgaaaataaatccgagaaatataacgacgagcgatataggatttttcatt
gcaccaatttttaatgcacttggaagaattgataattctaaaattgttgtaaatttcttt
attcaggaagatgattttaagcttttctcaataattgaggaaatgaaacgtgcgaataaa
atcagacggtatctggaaaatgagatttacagcgagctggaggaaaaaatacagcgtctg
gaacgtccaaaatacatttttatgaaaagtcgaaaatggcattctggcgtaattggtgta
gtttgttcaagaatttccataaagtataatattccagtgattcttatttcaataaaaaac
ggatatggaaaggcatcttgcagaagtatcgaaggaatcaatatttttgatattttaaaa
agtgtgtcggacaagctggagcggtttggagggcatgacttggcagctggatttcttgtt
tcggaaaaatatttaggcgaaattgaaaaacatttgcggcaaaaactggcaagaaaaaac
agggaaaatgtccaaaaaacattgtacgtggatgcctggctgaatatcgagaatttaaac
aagcgaaaattacatgaaataaacaggctttccccttttggattggataatcaggaacct
aattttatggattctgatgtgaatttttttaatttaacaaaatttgggataaataatcgg
catttcaaaggatttgtcagaaaaaataatcggattatttcagtaattggatataattta
ggacataaattaaagatgaataatttttataagaaaaaatttaaaatagtttatacacca
atatttaagtctgttcattcagatttgtttattgagctgaaaataaaagattttaagtaa
DBGET
integrated database retrieval system
