Leptotrichia buccalis: Lebu_1456
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Entry
Lebu_1456 CDS
T00975
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lba
Leptotrichia buccalis
Pathway
lba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lebu_1456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lba03019
]
Lebu_1456
03016 Transfer RNA biogenesis [BR:
lba03016
]
Lebu_1456
Enzymes [BR:
lba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Lebu_1456
Messenger RNA biogenesis [BR:
lba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Lebu_1456
Transfer RNA biogenesis [BR:
lba03016
]
Prokaryotic type
tRNA degradation factors
Lebu_1456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
OB_RRP5_4th
Formyl_trans_C
CoA_trans
KH-I_KHDC4-BBP
DUF6953
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
ACV39331
UniProt:
C7NB00
LinkDB
All DBs
Position
complement(1535145..1537247)
Genome browser
AA seq
700 aa
AA seq
DB search
MFEEKIYGFNLGNQKIKISTGKIARQAGGSVVVQCGGTMLLVTATRSKDVREGQDFFPLT
VDYIEKFYASGKFPGGFIKRETKPGTDEVLISRLIDRPIRPLFPEGFLNAVHIVVTVLSY
DEVNYPENLAIIGVSAALGLSDIPFAGTVAGVTVGYINGEYILNPTGEQLLESEIQLSVA
GTKDAVTMVEAGAKEVSEEVMLEAIMFGHEKIKEICAEQDKFLEQFDVQKYEFEKKEVDP
EIKEFIDGFENEVEKAIMTPGKLEKYEAIDNLEIELFEKYVQKLENEDKEIDENLEKEFK
KYYRDVEKRLVRDAILYKQYRADGRQTTEIRPIDVEIDTLPVPHGSALFTRGETQALVVA
TLGSKEDEQIIDGMEDETRKKFFLHYNFPPYSVGEAGFMRAPGRRELGHGNLAERALKYV
MPEQDKFPYTVRLVSEITESNGSSSQASICGGSLALMAAGVPIKSTVAGIAMGLIKEGDT
FTVLTDIQGLEDHLGDMDFKVAGTKDGITAIQMDIKIEGITREIMEIALRQALEGRLFII
DKMEAVISEPRAEVSENAPKIEILKISPDKIAGLIGPGGKVIRAIIDETGVSIDIEDDGT
VSIFGKESENMKKALELVKRQTQSVELNTIYEGKVTKLMKFGAFVEVLPGKEGLLHISEI
SNKRVEKTEDALKEGQNVRVKVISMENEDKFNLSMKALKQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagagaaaatttatggttttaatttaggaaaccagaaaattaaaataagtaca
ggaaaaatcgcacgtcaagctggaggttcagttgttgttcaatgtggcgggacaatgctt
ttagttacagcgactagaagtaaggatgtcagggaggggcaggattttttccctttaaca
gttgattatatcgaaaaattttatgcatcagggaaatttccaggtggatttataaaaagg
gaaactaagccaggaactgatgaagtcttgatttcaagattgattgacagaccaatcaga
cctttatttccggaaggatttttgaatgcagtacatattgtagttacggtgctttcttat
gatgaagtgaattatccagaaaaccttgctataattggagtttctgccgctttaggatta
tcagatattccatttgcaggaactgtggctggagttacagttgggtacattaatggagaa
tacatcttgaatccaacaggtgaacaattgttagaaagtgaaattcaattgtcagttgca
ggtacaaaagatgctgtaacaatggtagaggctggagctaaggaagtttctgaggaagtt
atgctggaagcgattatgtttgggcatgaaaaaattaaggaaatttgtgcagagcaagac
aaattcttggaacagtttgatgtacaaaaatatgaatttgagaaaaaggaagtagatcct
gaaatcaaggaatttattgacggttttgaaaatgaagttgaaaaggctataatgacacca
ggtaaactggaaaaatatgaagcgattgataacttagaaatagaactttttgaaaaatat
gttcaaaaacttgaaaatgaagataaagaaattgatgaaaatcttgaaaaagaatttaag
aaatattatagagatgttgaaaaaagacttgtcagagatgctattttatacaagcaatat
cgtgctgacgggcgtcaaactactgaaatccgtccaattgatgtagaaatcgacacactt
ccagtgccacacggttctgcattattcacacgtggagaaactcaggcattagttgttgca
acgcttggaagcaaggaagacgagcaaattattgatggaatggaagatgaaacacgtaaa
aaattcttccttcactataatttcccgccatattcagttggagaagcaggatttatgcgt
gcaccaggacgtcgtgaactgggacatgggaacttggctgaaagagccttaaaatacgtt
atgccagagcaagacaaattcccatatacagtaagacttgtttctgaaattacagaatca
aatgggtcatcatcacaggcttcaatttgtggaggctcgcttgcattaatggctgctgga
gtacctataaaatccacagttgcaggaattgcaatgggacttataaaagaaggagataca
tttacggtacttactgatattcaaggacttgaagatcatctgggagatatggactttaaa
gttgcagggacaaaagatggaattactgcaattcaaatggatataaaaattgaaggaatt
acaagagaaataatggaaatagctttaagacaggcattagaaggaagattgttcattatt
gataaaatggaagctgtaattagtgagccaagagcagaagtttctgaaaatgcaccaaaa
attgaaattctgaaaattagtcctgacaaaattgctggacttatcggaccaggtggaaaa
gtaattagagcgattattgatgaaacaggagtttcaatagatattgaagatgacggaact
gtttcgatttttggaaaagaatctgaaaatatgaaaaaagcattggaacttgtaaaaaga
caaactcagtcagttgaattaaatacaatttatgaaggaaaagttacaaaactgatgaaa
tttggtgcatttgtggaagtattacctggtaaagaagggcttttacatatttctgaaata
agtaacaagagagttgaaaagactgaagatgcactaaaagaagggcaaaatgtgagagtt
aaggtaatttcaatggaaaacgaagataaatttaacttgagcatgaaagcattaaagcaa
taa
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