Entry |
|
Name |
(GenBank) MutS2 family protein
|
KO |
K07456 | DNA mismatch repair protein MutS2 |
|
Organism |
lba Leptotrichia buccalis
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:lba00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lebu_2105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lba03400]
Lebu_2105
DNA repair and recombination proteins [BR:lba03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Lebu_2105
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2246612..2248951
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AA seq |
779 aa
MEKNYDVLEFYKIVNELIDLSRLEKTKEKFLDIDIIKEKSVLDKELMLMMEMIDFYKYDD
GLELAGLANITKMMNSIDIIGSYLSAEDLAVLKKNLTIFRISKSRAKNVRDKYRTIWNLF
SDVEEVKDIENFISEAINDEGVLKDEASIGLRDVRRQKQNINANIKEKFDELISNKSTQN
AIQERIITQRNDRYVIAVKTDFKGLIKGIEHDRSATGSTVYIEPLNVVSLNNKLREYEAR
EREEIRKILLRLTELVKTKKEEILEIKEILERLDFIDAKTTYSVNKKCIVPKIINKEYLK
LVEARHPLIGENTVVPINFELGNPENIMLITGPNTGGKTVTLKVAGLLTIMALSGIPIPA
NEKTEIGYFHNVLADIGDEQSLEQNLSSFSGHVSKIKDIIENANSKSLVLMDELGSGTDP
MEGAAFAMAIIDYLNKKHVTSIITTHYSEVKAYAFNTTGIKSASMEFNVETLSPTYRLLE
GIPGESNALIIARKYGISEEVIENAKSYISEDNQRVEEMLKSIKEKNDELETMQAQLEAT
RTELDKQKSIYEQNMIKLENEKNEIIKRAYEEADNYLKNMQAKAKNLIDKINSEESKKED
AKNAQRSLNMLRESFITDKKKNVKEKKVVTQNVDFAVGEEVLVKTMNQNGKILKIMPNNR
IQVQTGILKLVVSTDDIVKIQKKKTNKFKNFASLKRTSQVRGEIDLRGMNADEAIAELET
YMDRAMLTGYHEIYIIHGKGTMVLRKKIHEYLRTSKYVTEFKDANQNEGGIGCTVVILK |
NT seq |
2340 nt +upstreamnt +downstreamnt
atggaaaaaaattatgatgtattggaattttataagatagttaatgaactcattgattta
tcaagattagaaaaaacaaaagaaaagtttctggatattgatattataaaggaaaagtca
gttttggataaggaacttatgcttatgatggagatgattgacttttataagtatgatgat
ggtttggaacttgcagggcttgcgaatattactaagatgatgaattccattgatattatt
ggttcttatttgagtgctgaggatttggcagttctgaagaaaaatttgacaatttttaga
atttctaaaagcagggctaagaatgttagggataaatatagaacgatttggaatctgttt
agtgatgttgaggaagttaaggatattgagaactttatttcagaagcgattaatgatgaa
ggggtattaaaagatgaggcttcgattggacttcgtgatgtaagaagacagaagcagaat
attaatgcgaatattaaagaaaaatttgatgagctaatttctaataaaagtacgcaaaat
gcgattcaggaaagaataataactcaaagaaatgatagatacgtaattgctgtaaagaca
gattttaaagggcttattaaaggaatagaacacgataggtctgcaacaggaagcacagtt
tacattgagcctttaaatgttgtttcattaaataataaattgcgtgaatatgaggctcgt
gagcgtgaggaaattagaaaaatacttcttagacttacagaacttgtaaaaacgaaaaag
gaagaaattctggaaattaaggaaattttggaaagactggacttcattgatgcgaaaacg
acttattcggttaataagaaatgtattgttccaaaaattattaacaaagaatatttgaag
ctggttgaagcaagacatccgttaattggtgaaaatacagttgtgccaattaattttgaa
cttggaaatcctgaaaatataatgcttatcacagggcctaatactggagggaagacagta
acattaaaagtggctggacttcttacaattatggcattatctggtatcccgattcctgca
aatgaaaaaactgaaattgggtattttcacaatgtactggctgacattggggacgaacaa
agtctggagcaaaacttatcctcattttcagggcatgtaagcaaaataaaagatataatt
gaaaatgcaaacagtaaatcgcttgtactgatggacgagttgggaagtggaactgatcca
atggaaggagctgcttttgcaatggcaatcattgattacttgaacaaaaaacacgtaact
tcaataatcacaacccattacagcgaagtaaaagcatacgcctttaacacaacaggaatt
aaaagtgcctcaatggaatttaacgtggaaacattgtctccaacgtacagactgctggaa
ggaataccaggagaaagcaacgcccttataattgcaagaaaatacggaattagcgaagaa
gtaattgaaaatgcgaaaagctacataagtgaagataatcagcgtgtcgaagaaatgctg
aaatcaataaaggaaaaaaatgacgagctggaaacaatgcaggcacaattagaagcaaca
agaactgaacttgacaagcaaaaaagcatttatgagcaaaatatgataaaacttgaaaat
gaaaaaaatgaaattataaaacgtgcctacgaggaagctgacaattacttgaaaaacatg
caggcaaaagctaaaaacttaattgacaaaattaacagtgaggaatctaaaaaagaagat
gccaaaaatgctcaaagaagcctgaatatgctacgtgaatcattcattacagataaaaag
aaaaatgtaaaagaaaagaaagttgttactcaaaacgtagattttgctgttggagaagaa
gtacttgtaaaaacaatgaatcaaaatggaaaaattttgaaaataatgccaaacaaccgt
atccaagtacaaacgggaatattaaagctggttgtatcaactgacgacattgtaaaaatt
caaaagaaaaaaacaaacaaattcaaaaactttgcctcattaaaacgaacttcccaagta
cgaggagaaatcgacttacgtggaatgaacgccgacgaagcaatcgcagaattagaaaca
tacatggacagagcaatgctcacaggctaccacgaaatctacataattcacggaaaagga
acaatggttctaagaaaaaaaatccacgagtacctaagaacttcaaaatatgtgacagaa
tttaaggatgccaatcagaatgaaggtggaattgggtgtactgtggttattttgaagtag |