Lentisphaerae bacterium WC36: LJT99_03165
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Entry
LJT99_03165 CDS
T10936
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lbac Lentisphaerae bacterium WC36
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbac03032
]
LJT99_03165 (topA)
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_03165 (topA)
Enzymes [BR:
lbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LJT99_03165 (topA)
DNA replication proteins [BR:
lbac03032
]
Prokaryotic type
DNA Topoisomerases
LJT99_03165 (topA)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJT99_03165 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
ARID
DUF6673
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UDQ98540
LinkDB
All DBs
Position
696836..699364
Genome browser
AA seq
842 aa
AA seq
DB search
MAADKLVIVESPTKARTIGRMLGKDYKIIASMGHVRDLPKSSIGVDVENDFKPKYQQSRE
RSKLIKELKDAAKKAKQIYLAPDPDREGEAIAWHLEELLKKSTNGDFFRVTFHEITKSAI
EHAFADTTDINMNLVESQQARRILDRLVGFKVSPLLWSKIQRNISAGRVQSVALRIVCER
EREIMAFEPKEYWNFMADLAKMPNPNNIAPFTTKLHKINNKKFEINNETDATSVLNAVKS
GYGFTVSKIERKPRQRRAQPPFITSTLQQAASSNLGFSASNTMRLAQQLYEGIDTGSGPV
GLITYMRTDSVNLAAEAINNCRDYIQNNIGADYLPVKPNYYKSKSNAQEAHEAIRPTNVE
MTPKEAAKYLDERQLKLYTLIWNRFVACQMAPAKLAQTSVEVGTNGNDSNLYTFRITATV
TVFPGFSKIYKADDAEDDVKELNEVLNSLNEGDKCELKALNNEQKFTEPPPRYSEASLIR
ELESNGIGRPSTYASIVNTIQNREYVDKEKGRLIPTELGFKVNDYLILSLPDLFQIGFTA
NMEESLDKIEEGSLQWQQMLKDFYGPFEEWLEQAKDVGAPKPQYVENILPVLKKITKFAE
PQKVGRRTYDDSKFLSSIEEKFIKDNKISEKQWETLLRLAITYYSQIGKEVEDYLAQNVD
IKAKYAEVLEKVKIQQEKIAASTASDDLKKAYEKVFADFVNVEWNEPEVRRGRTYDDKKF
FTSLQAQAERGKVLSERQLAALGAIAVKYKETIPNFEAVMEFLNVSSEDSGGQADPEIAK
LIEKFKNFTGWAEPQKKGKRVFDEKSFYESLATQFSAKGNLTPRQVGALKRMDKKYFAPK
EN
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagataaattagtgattgtagaatcaccaaccaaagcacgaactattggtaga
atgctcggaaaagattataaaattattgcttcaatggggcacgtgagagatttgcctaaa
tcaagtattggagtggatgttgagaatgattttaagccaaagtatcaacaatcaagagag
cgtagtaaattaattaaagaattaaaagatgctgcaaaaaaagcaaaacaaatttacttg
gcgcccgaccccgaccgtgaaggagaggcgattgcatggcacttagaagaattattgaag
aaaagtactaatggcgatttttttcgtgtaacatttcatgaaattaccaaaagtgctatt
gaacatgcatttgctgatacgacagatattaatatgaatttagttgaatctcagcaagca
cgtagaattttagatcgtttagtgggtttcaaagttagtccacttttatggagtaagatt
caacgaaacatcagtgcaggtcgtgtacaatcagtagcgttacgcattgtgtgtgaacgt
gaacgtgaaataatggcatttgaacccaaagaatattggaattttatggctgatttagca
aaaatgcctaatccaaacaacattgcaccattcacaacaaaattacataaaatcaacaat
aaaaagtttgaaataaataatgaaactgatgcgacaagtgtgttaaatgctgttaaaagt
ggctatggctttactgttagtaaaattgagcgtaaaccacgtcaacgtcgagctcaacca
ccatttattaccagtacattgcagcaagcagcgagttcaaatttaggattttcagcaagc
aatacgatgcgtttagcgcagcagctttatgagggtattgatactggtagtggtcctgtt
ggtttgattacttatatgagaacagattcggttaatttagcagctgaagcaatcaataat
tgccgtgattatattcaaaataatattggagctgactatttacctgtaaaaccaaattat
tataaaagcaaatcaaatgctcaagaagcgcatgaggcgattcgtccgactaatgttgaa
atgactccaaaggaggctgcaaaatatttagacgagcgtcaattaaaactttataccttg
atttggaatcgttttgtggcatgtcaaatggcgcctgcaaagttggcacaaacaagtgtt
gaggtgggtactaatggtaatgatagtaatttatacacttttagaattactgcaacagtg
acggtttttcccggatttagcaaaatttataaagctgatgatgctgaagatgatgttaaa
gagttaaacgaagtcttaaatagtttaaatgaaggcgataaatgtgagcttaaagcattg
aataatgagcagaaatttactgaacctccgccaagatatagtgaggcgtcattgattcga
gagttagaatctaatggtattgggcgaccttcaacatatgcgtcaattgttaacacaatt
caaaaccgtgaatatgttgataaggaaaaaggacgtttaattccaactgaattaggtttc
aaagtcaacgattatttgatattgtcattacctgatttatttcaaattggtttcactgct
aatatggaagaatcgttagataagattgaagagggttcacttcagtggcaacaaatgtta
aaggatttttatggaccatttgaagaatggttagagcaggcaaaagatgttggtgctcca
aagccacaatatgttgaaaatattttgccagtgttaaagaaaattactaagtttgctgaa
cctcaaaaagttgggcgtcgtacctatgatgatagtaagtttttaagttcaattgaagag
aaattcattaaagataataaaatttctgaaaagcaatgggagacgttgttgcgcttagct
atcacttattacagtcaaattggtaaagaagttgaagattatttagcgcaaaatgttgat
ataaaagctaagtatgccgaagtgcttgaaaaggttaaaatccaacaagaaaagattgct
gcttcaactgcttcagatgatttgaaaaaagcatatgagaaggtgtttgcagattttgtt
aatgttgaatggaatgagcctgaagttcgtcgtggacgtacttatgatgataaaaagttt
tttacttcattacaagctcaagctgaacgaggaaaagttttaagtgagcgacagttagct
gctctaggtgcgattgcggtaaaatataaggagacgattccaaattttgaagctgtaatg
gaatttttaaatgtttcaagcgaagactcaggcggtcaagcagatccagaaattgcaaaa
ttaattgagaaatttaaaaattttactgggtgggcagaaccgcaaaagaaaggcaaacga
gtttttgatgaaaaatcgttctatgaatcgttagcaacgcagttctctgctaaaggaaac
ttaacaccacgtcaagtgggggcgttaaaacgcatggataaaaaatattttgctccgaaa
gaaaattaa
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