Lentisphaerae bacterium WC36: LJT99_06500
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Entry
LJT99_06500 CDS
T10936
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lbac Lentisphaerae bacterium WC36
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbac03009
]
LJT99_06500
Enzymes [BR:
lbac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LJT99_06500
Ribosome biogenesis [BR:
lbac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LJT99_06500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
PrmA
Cons_hypoth95
Methyltransf_31
Methyltransf_ANTKMT
Methyltransf_25
MTS
Methyltransf_32
Methyltransf_11
PabTrmU54_TRAM_dom
N6_N4_Mtase
UPF0020
Methyltransf_12
B0228-1_like
Motif
Other DBs
NCBI-ProteinID:
UDQ99179
LinkDB
All DBs
Position
complement(1516621..1517883)
Genome browser
AA seq
420 aa
AA seq
DB search
MQQIFKIKIDNVAFGGDGVGRVNNLVCFVPGTLQGEFVEVKITKEKHNYLRAKLLKVIEA
SPERIDIVCPYAVIPTANKGADFCPGCAYMHASYNEELRMKHQQFIEMLERNGKFDINND
IEKVNDIVGSDSELYYRNKITLHAQLEGRERFLGYIKSDNENVVDIEQCAIADKLINKKL
ADLRSNKGFYHSLHREMSVTLKKITNKKGEDEVLFWRNNPKENASWVRQQTIYGNFSTPL
GSFQQINQSVTDKLMKKVHDIIKETKTQSNVDSCVDLYCGSGLFAMAAAEAGIKNITGIE
ADEKAVVAATFNLKDYDLQDNVKFLTGKVEKSLKNFKRFNDLSKTILIVDPPRNGLHRNV
REVLSELPFAKIIYISCAPDTLCRDLKVFSKKGWKIAQTGVYDMFPRTGHFESLTVLEPC
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaatatttaaaataaaaattgataatgtagcctttggtggcgatggagtaggg
cgtgtaaataatttagtttgcttcgtacctggaacgttacagggtgaatttgtcgaagta
aaaataactaaagagaaacataattatttaagagccaaattattaaaagttattgaagcc
tcaccagagcgaattgatattgtctgcccatatgcggtaataccaactgcaaataaaggt
gctgatttttgtcctggatgtgcttacatgcatgcttcttacaatgaagagcttcgcatg
aagcatcaacaatttattgaaatgttagagcgtaatggtaaatttgacattaacaatgat
attgaaaaagttaatgatattgttggtagtgatagtgaattatactatcgcaataaaatc
acattacatgctcaactagaaggacgtgaacgctttttaggttatattaaaagtgataat
gaaaatgtggttgatattgagcaatgtgcgattgctgataaattaattaataaaaaatta
gctgatttacgctcaaataaaggattttatcattctttacatcgtgaaatgagtgtaaca
ttaaagaaaattaccaataaaaaaggtgaagatgaagttttgttttggcgcaacaatcca
aaagaaaatgcttcatgggtacgccagcaaacaatttatggaaatttttcaactccgcta
ggtagttttcagcaaattaatcaatcggtgaccgataagttaatgaaaaaagttcatgat
attattaaggaaactaaaactcaaagtaatgttgatagttgtgttgatttatattgtggt
tctggtttgtttgcaatggctgcagctgaagctggaattaaaaatattactggaattgaa
gctgatgaaaaagctgttgttgctgcaacgtttaatctaaaagattatgatttacaggat
aatgttaaatttttaactggaaaagttgaaaaatcattaaaaaactttaaaagattcaac
gatttaagcaaaacaattttaatagttgatcctcctcgaaatggattacatcgtaatgtt
cgtgaagttttaagtgaattgccatttgctaaaattatctacatttcgtgtgcgcctgat
acgttgtgtcgagatttaaaagtgttttctaaaaaaggttggaaaattgctcaaacaggt
gtttatgatatgttcccaaggacagggcattttgaatcattaacagttttagaaccatgt
taa
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