Lentisphaerae bacterium WC36: LJT99_07415
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Entry
LJT99_07415 CDS
T10936
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lbac Lentisphaerae bacterium WC36
Pathway
lbac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJT99_07415 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_07415 (nfo)
Enzymes [BR:
lbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LJT99_07415 (nfo)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LJT99_07415 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
S6OS1
Motif
Other DBs
NCBI-ProteinID:
UDQ99358
LinkDB
All DBs
Position
complement(1694173..1695018)
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AA seq
281 aa
AA seq
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MTKYIGAHVSTAGGVHNAPINAHEIGATAFALFTKNQRRWVAKPFTTKEIDEFKENCEKF
NFTVDQILPHDSYLINLGHPEAEKLEKSRAAFLDEMQRCEELGLKLLNFHPGSHLKQISI
DECLAKIAESINITLDKTTTGIAVIENTAGQGSNVGFQFEHLAAIIDKVEDKKRVGVCID
TCHSFAAGYDLRTAEACEKTFKHFDEIVGFKYLRGMHINDAKSEFESHVDRHHSIGQGNI
GKECFKYIMKDSRFDNIPLVLETIDPEIWAQEISWLQDQAK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatatattggagcgcatgttagtacagctggaggagtccataatgctcctatt
aatgctcatgaaattggagcgactgcatttgctttatttacgaaaaatcaacgtcgttgg
gtcgcgaagccattcacaactaaggaaattgatgaatttaaggaaaattgtgaaaaattt
aattttaccgtagatcaaattttaccacacgattcatatttaatcaacttaggtcatcca
gaggcagaaaaactagaaaaatcacgtgcggcatttttagatgaaatgcaacgttgcgag
gagctaggacttaagttattaaattttcatccaggaagtcatctaaaacaaatttcaata
gatgaatgtttagcaaaaattgctgaatcaattaacataactttggacaaaacgactact
ggaattgctgtaattgaaaatactgcagggcaggggtctaatgttgggtttcaatttgaa
catttggctgcgatcattgataaagttgaagacaaaaaacgtgttggtgtctgcattgat
acatgtcactcttttgctgccggttatgatttaagaactgctgaagcatgtgaaaaaaca
tttaagcattttgatgagattgttggttttaaatatttgagaggtatgcatatcaatgat
gccaaaagtgaatttgaaagtcatgttgatcgtcatcatagcattgggcagggtaatatt
ggcaaagagtgttttaaatatattatgaaagatagccgttttgacaatattccattagtt
ttagaaacaattgatccagaaatttgggctcaagaaatctcttggcttcaagatcaggca
aaataa
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