Lentisphaerae bacterium WC36: LJT99_08660
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Entry
LJT99_08660 CDS
T10936
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lbac Lentisphaerae bacterium WC36
Pathway
lbac03410
Base excision repair
lbac03430
Mismatch repair
lbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJT99_08660 (recJ)
03430 Mismatch repair
LJT99_08660 (recJ)
03440 Homologous recombination
LJT99_08660 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_08660 (recJ)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LJT99_08660 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LJT99_08660 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LJT99_08660 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UDQ96574
LinkDB
All DBs
Position
complement(1995470..1997188)
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AA seq
572 aa
AA seq
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MGKKIWICAGNTLEKRISELMAEFSLPRPIALFLANRDVDVENVELFMNPVLNKLSDPYR
FPGIKDAVARLWDAICNDEPILIHGDYDTDGITATALLSNVLRQNGARVFSFIPHRFDDG
YGFTPESLDKALEHMDKKCGVLVTVDCGITSIDAVEHAKKLGIDVVITDHHEPINELPDA
LAIINPKVYSELNDLDLLAGAGVAFKLSHAFIKWGREQKIGGFNTKLQEVLDYVALGTIA
DIVPILGENRILVKYGLEILKKQLRPGVRALIESARASQKLKTSDITFKLAPRLNASGRL
GDAYASLALLESDNIVEAYQYAAKLDEYNHDRQELEQEIYAQAKAIIENEMNIKNINSIV
VAGENWHQGVIGIVASRLARDYNRPAIVLTIIDGMAHGSGRSIGSLNLVDVLMKCSGLLQ
RHGGHPMAVGLGLKSDNIAEFTEKFEKYTKESLSEHDLCNSTVYDGDVELRELDEQFFAI
LEKLSPFGHSNNKPLFRFNNLETVKCTPIAGNKHCRGILRNHKNEQIEFIAFNCKREDVS
RYPMDILATPQINEFYNERRPQLQIIDMIPSC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaatatggatatgtgctggtaatacattggaaaaacgcattagcgagttg
atggcagaattttctttgccacgaccaattgctttatttttagctaatcgtgatgttgat
gtggagaatgtcgagttgtttatgaatccagttctaaacaaacttagtgacccttatcga
tttccaggtattaaagatgctgttgcacgattgtgggatgctatttgtaatgacgaaccg
attttaattcacggtgattatgatacagatggtattactgctactgcattgcttagtaac
gtgttgcgtcagaatggagctagagttttttcttttatcccgcatcgctttgatgatggt
tatggatttacgcctgaatctctggataaggcactagagcatatggataaaaagtgtggg
gtactagttacagttgactgtggaattactagtattgatgctgtggaacacgcaaaaaaa
cttggtattgatgtggttataacggatcatcacgagccaataaatgaattgcctgatgct
ttggcaattattaacccaaaagtttattcagaattgaatgatttagatcttttagcaggg
gctggagttgcctttaaactttctcatgcatttataaaatggggtcgagagcaaaaaatc
ggaggatttaataccaagttacaagaagttttggattacgtagcattaggaaccattgct
gatattgtaccaattttaggtgaaaatcgtattttggttaagtatggtctagaaatttta
aagaaacaacttcgtcctggagttcgtgctcttatagagtcagctcgtgcttctcaaaaa
ctaaaaacaagtgatattacttttaaattagcaccaaggttgaatgcttcaggtcgactt
ggcgatgcttatgcttcgttagcattattggaatcagataatattgttgaagcgtatcaa
tatgcagcaaagcttgatgaatataaccatgatcgtcaagagttagagcaagaaatttat
gctcaagctaaggctattattgaaaatgaaatgaatattaaaaatatcaattcaattgtt
gttgctggtgaaaattggcatcaaggtgttattggtattgtggcttcacgtttagctcgc
gattataaccgtccagctattgtgttgacgattattgatggaatggcgcatggatcaggg
cgtagtatcggatcattgaatttggtcgatgtgttgatgaaatgttctggcttattacaa
cgtcatggtggtcatcctatggcggtggggcttggcttaaaaagtgataatatcgctgag
tttactgaaaaattcgaaaagtataccaaggaatcactcagtgaacatgatttatgtaat
agtactgtttatgatggtgatgttgagttgcgtgaattagatgaacagttttttgctatc
ttagaaaagcttagcccttttggccatagtaataacaagccgttatttaggtttaataac
cttgaaactgttaagtgcacgccaattgcaggtaataaacactgtcgaggaattttacga
aaccataagaatgaacaaattgagtttattgcttttaattgtaagcgtgaggatgttagc
cgttatccaatggatattttggctactccgcaaattaatgaattttataatgaacgtaga
cctcaactacaaattattgatatgattcctagttgttaa
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