Lentisphaerae bacterium WC36: LJT99_09035
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Entry
LJT99_09035 CDS
T10936
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lbac Lentisphaerae bacterium WC36
Pathway
lbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJT99_09035 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_09035 (recD)
Enzymes [BR:
lbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LJT99_09035 (recD)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LJT99_09035 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_22
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
SLFN-g3_helicase
RecD_N
SH3_13
ATPase_2
NTPase_1
ResIII
AAA_5
nSTAND3
PhoH
ABC_tran
AAA_24
DO-GTPase2
AAA_16
FtsK_SpoIIIE
DEAD
nSTAND_NTPase5
AAA_28
NPHP3_N
Aq_aa27
AAA_29
Terminase_6N
MukB
CbiA
ASNSD1-SEP
MeaB
Motif
Other DBs
NCBI-ProteinID:
UDQ96644
LinkDB
All DBs
Position
complement(2096116..2098179)
Genome browser
AA seq
687 aa
AA seq
DB search
MTEILKTIDKLKEYKLINYIDWSFVNFIADVLRENCTKEIMVVALLTSYSFNQHQNICLD
LNLINTQEKFECFFDNIEHLIPEDQNKVKHILQQLYIDLNQTVSDLAKLENSDVVAIVKD
SANLKKVPLKPLIFDGISKVYLQRYYVYELYLASSIAERVKLNNLKIAEFLDSPSGLRQK
QIKGLLEDIYRIGTRFKKNKAINYQVLAIINAYFNNFAVITGGPGTGKTTVIATILALLL
EKNSDLTVKIVAPSGKAQARVSESINEEIAFLSTSTEVLSALKNIEASTIHRLLGAVYNS
AQFKHNKHNKISADVIIVDELSMVSSMLMAKLINAIDKNTKIILLGDRDQLSSVEAGALM
ANLYDVFKVNCYSKSFFDELIVSMPYLRMHQEQLCNSNKSRDIFYNIATKLQHSYRFSPD
KGIGIVTKKINEAPAQFNAEHFSEILYEMHHDRTNKFHALNINDMNKHSDEEIEKYLKNF
VKDLSFVDKKNGKKVMFSDYLQCQRVQEAYQLLNRFKILTADNVSRFGVHSINHIVEEVL
NLPVGKSLYHGRVVIITENDYNLKLFNGDIGLFWRDKNSSQIGVFFPDSESPDKFIEISP
GRLPQHETVFAMSVHRSQGSGFEKVLFLLLNKPNLSLINRELIYTAITRAKEDVHLIYNL
ETLKKGLFCQTKRSTGLAEHLTARLKG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaattttaaaaacaattgataaacttaaagaatataaactaatcaattatatt
gattggagctttgtaaattttattgcagatgttttacgggaaaattgtaccaaagaaatt
atggttgtagcgcttttgacttcatattcatttaatcaacaccaaaatatttgtcttgat
ttaaacttgattaatactcaagaaaaatttgagtgtttttttgataatattgaacactta
attcctgaagatcaaaataaagtgaaacacattttacagcaattatatattgatttaaat
caaacagttagtgatttagcaaaactagaaaatagtgatgtcgttgcaattgttaaagat
tcagcgaaccttaaaaaagttccattaaaaccattaattttcgatggaattagtaaagtt
tatttacaacggtattatgtttatgaattatatttggcgtcgagcattgctgaacgtgtt
aagttaaataacttaaaaatagcggagtttttagattctccgagcgggctgcgacaaaaa
caaataaaaggattattagaagatatttatcgtattggcacgagatttaagaaaaataaa
gctattaattatcaagttttagcaataattaatgcgtattttaataattttgcagttata
actggaggtcctggaacaggaaaaacgactgtgattgcaactatattggccttactacta
gaaaaaaacagtgatttaacagtcaaaattgttgcgccaagtggaaaagctcaagctaga
gttagtgaatcaatcaatgaagaaattgccttcttaagcacatcaacagaagtcttaagt
gctctaaaaaacattgaagcatcaaccattcatcgtttgttaggcgcagtatataatagt
gctcaatttaaacataataagcacaacaaaatttctgcagatgttattatagttgatgaa
ttatcaatggtgtcgagtatgctgatggcaaaattaattaatgcaatagataaaaatacc
aaaattattttactcggggatcgtgatcagttatcaagtgttgaagctggagcattaatg
gcaaacttgtatgatgtttttaaagtaaattgttatagtaaaagttttttcgatgaatta
attgtgtcaatgccatatttgcgaatgcatcaggagcaattatgtaattcaaataagagt
agggatattttttataatattgcgactaaattgcaacattcatatcgattttctcctgat
aagggcattggcattgtaactaaaaaaattaatgaagccccagctcagtttaacgctgaa
cacttttccgaaattttatatgaaatgcatcatgatagaaccaacaaatttcatgcatta
aatattaatgacatgaataaacatagcgatgaagaaattgaaaaatatcttaaaaatttt
gttaaagatttatcatttgttgataaaaaaaatggcaaaaaagttatgtttagtgattat
ttgcaatgccaaagagttcaagaggcatatcaattacttaatagatttaaaattttaact
gcggataatgtgtcacgttttggggtacacagcattaatcacattgttgaggaggtttta
aatttaccagttggtaaatcattatatcatggtcgtgttgttattattactgaaaatgat
tataacttaaaattatttaatggtgatattgggttattttggcgtgataaaaatagttca
caaataggtgttttttttcctgatagtgaaagtcccgataaatttattgaaattagtcca
gggcggttgccgcagcatgagaccgtttttgcaatgagtgtgcatcgttcgcaaggttct
gggtttgagaaggtgctatttttattgctaaataaaccaaatttaagcctcattaatcgg
gaattaatttatacggcgattactcgtgctaaagaagacgtacatttaatttataacctc
gaaacgcttaaaaaagggttgttttgtcaaactaaacgcagtacaggattagcagaacac
ctaacagcgcggttaaaaggctaa
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