Lentisphaerae bacterium WC36: LJT99_11495
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Entry
LJT99_11495 CDS
T10936
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbac Lentisphaerae bacterium WC36
Pathway
lbac03030
DNA replication
lbac03430
Mismatch repair
lbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LJT99_11495 (dnaE)
03430 Mismatch repair
LJT99_11495 (dnaE)
03440 Homologous recombination
LJT99_11495 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbac03032
]
LJT99_11495 (dnaE)
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_11495 (dnaE)
Enzymes [BR:
lbac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LJT99_11495 (dnaE)
DNA replication proteins [BR:
lbac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LJT99_11495 (dnaE)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LJT99_11495 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
HHH_3
Motif
Other DBs
NCBI-ProteinID:
UDQ97104
LinkDB
All DBs
Position
2660946..2664479
Genome browser
AA seq
1177 aa
AA seq
DB search
MAADFVHLHVHSHYSLLDGACTIKGLAEMAKENNMSAVAITDHGFMGGTIDMYNTFTRSG
LKPIIGCEAYVSPTDRFDKNSAVPNIRGNHLVLLAKNYDGYINLCKLISEAYSTGMFYKP
RIDKELMAQYSDNLIALSACIGGEVPQSILNGNIDLARKQIGEHIDIFGKDNYYLELMDH
GMEEEIRVNRELITLSKEFDLKCVATNDVHYLRKEHAKAHEIMLCIQTQSKLDDPKHFQF
PAPEFYFKSTDEMKELFKEIPESITNTVEVAEKCDIEFKFAPEVNHYPKYDPNDSFEDEK
HKLREICLDGLEERYKFNPRDEENLTEEDQAKIDRMDYELDVISTTQYCSYFLVVADFIK
YAEDIGVPVGPGRGSGAGSLVAYLTHITNIEPLRYNLLFERFLNPERVSPPDFDIDFCEK
RRVEVIEYVRNKYGSESVAQIGTYGTLKAKAVIKDVARVMGLNFADGDKITKLIPTDPKM
TLAKAKAEVPELVELIETDPVVAEIFEYAEVLEGVNRNMSIHAAGVIIGDQRLDNLVPLA
RGAGGEVITEFPAVPCEDLGLLKMDFLGLRTLTVIQEAVDNVKMSKGIEIDWDTTSLEDK
NTFDLLSRGDTVGVFQLESGGMQNLCRSFGVETVEHIIALLAIYRPGPMQFIPDFIDCKM
GRKEIVYDHPKMEPLLNETYGIMLYQEQIMQVVQVLAGFTLGQADILRRAIGKKKEDVLA
QQKAKFVEGCKKASDINEKLADQIWAKIELFAGYGFNKSHSAAYGFLSYRTAYLKANYPE
EFMAAVLSSEINNAEKIAFFIGECKEMGISILPPCVSKSEINFTVDGNSVRFGLGAIKGC
GEAAASKIIATRKADGAFESLLDFCERAGDAMNSRMMENLTRSGAFDSFGHKRSQLLQLA
EPTLKHAAQSRKDKESGQGSLFDMLAEPDDSMEIPVPNIPELDEHEILSSEKELLGFYVT
GHPLSKYSEILSNYTTSTTVKISEMNDREGIKCGGIIKSIQRKITQKGAHWAILELEDLY
GTIECLVYSRTLEEAEMNGVEFAEDKLIFVEALTQKRDENARVNLTAQKIIPLDFVMAQN
TNEIHLHLYEGSATTEKITKLKNLCNNYPGETEVILAATLSSGEIVFIEASSKMKISVDE
DFLTQIRDILGEKRYRLKADLTVPKPKNNFYRKKSDS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagattttgtacatttgcacgtgcattctcactatagtttactagatggagcg
tgtacgataaaaggtttagccgaaatggcaaaagaaaacaatatgagcgcagtagcaatt
actgaccacggattcatgggtggtactatcgatatgtataatacttttacacgctcgggt
ttaaagccaattattggctgtgaagcatatgtttcacctacagatcgttttgataaaaat
tctgcggtgccgaatattcgtggtaatcacttggttttattagctaaaaattatgacggc
tatattaatttatgtaaattaatcagcgaagcatactcaactggaatgttttacaaacca
agaatcgataaagaattgatggctcaatacagcgacaacttaattgcattatctgcatgt
attggaggtgaagtgccgcagagtattttgaatggcaacatcgacttagcgcgcaaacag
ataggcgaacatattgatatttttgggaaggataattattaccttgagttaatggaccat
ggcatggaagaggaaattcgtgttaatcgtgaattaattaccttaagcaaagaatttgat
ttgaagtgcgttgcaaccaacgacgtacattatttgcgaaaagagcatgcaaaagcacat
gaaattatgctttgtattcaaacacaatcaaaactagatgatccaaaacattttcaattc
cctgctccagaattttattttaaaagcactgatgaaatgaaagagctatttaaagaaatt
ccagagtcaattacgaataccgttgaagtcgctgaaaaatgcgatattgagtttaaattt
gctccagaggtcaaccactaccctaaatatgacccaaatgattcatttgaagatgaaaaa
cataaactgcgtgaaatttgtttagatggtcttgaagagcgttataaatttaatcctcgc
gatgaggaaaatttgacggaagaagatcaagctaaaatcgaccgtatggattatgaatta
gatgttatttcaacaactcaatactgcagttatttccttgtagttgcagactttattaag
tatgcagaagatattggtgttccggtaggaccaggacgtggttctggtgctggtagttta
gttgcctacttaacccatattacaaatattgaaccgctacgttataatttactgtttgag
cgttttcttaatcctgaacgtgtcagtcctcccgactttgatattgacttctgcgagaaa
aggcgtgtcgaggttatcgaatatgttcgcaataaatacggttctgaatcagttgcgcag
attggaacatatggaacattaaaagcaaaagcggttattaaggacgttgctcgagtaatg
ggcctcaattttgctgacggtgataagattacaaaattaattccgaccgacccaaaaatg
acattagcaaaagcaaaagctgaggttccagaacttgttgagttgattgaaacagatcca
gtagttgcagaaatttttgaatacgctgaagttttagaaggtgtaaaccgtaatatgtca
attcacgctgcgggtgtaattattggagaccaacgccttgataacttagtgccgttagcg
cgtggagctggtggtgaagttattaccgagtttcctgcagtaccgtgtgaagatttaggt
ctactaaaaatggacttcttaggcttaagaacattaacagtaatccaagaagctgtagat
aatgtcaaaatgagcaaaggcattgaaattgattgggatacaacatctttagaagacaaa
aatacctttgatttattatctcgcggtgacactgttggtgtattccagctagaatcaggt
ggaatgcaaaatttatgccgctcattcggtgtagaaacagtagagcatattattgcatta
ttagcgatttatcgcccaggtccaatgcaatttatccctgattttattgactgtaaaatg
ggacgcaaagaaattgtttatgaccatcctaaaatggagccattattaaacgaaacctac
ggtattatgctttatcaagagcagattatgcaggtagttcaggttttggcaggcttcacc
ttaggtcaagcagatattctccgtcgtgcaattggtaaaaagaaagaagacgttttagcg
caacagaaagcaaaatttgttgaaggttgtaagaaagcttctgatattaatgaaaaatta
gccgaccaaatttgggcaaaaattgaattatttgctggttacggtttcaataaatcgcac
tctgcagcttatggatttttatcatatcgtacggcatacttaaaagcaaattatcctgaa
gaatttatggcggcggtgttatcaagtgagattaacaatgccgaaaaaattgcattcttt
attggcgaatgcaaagagatggggatttcaattttgccaccatgtgtaagcaaaagtgaa
atcaactttacagtggatggaaactcagttcgttttggattaggggctattaaaggttgc
ggtgaagctgctgcgagtaaaattattgccacccgtaaagcagacggagcgtttgaatca
ttgttagatttctgtgaacgcgctggcgatgcaatgaattcacgtatgatggagaatttg
acccgtagtggagcatttgattcttttggtcataaacgttcacaattattacaattggca
gaaccgacgttaaaacatgcagcacaatctcgaaaagataaagagtctggacaaggatca
ttatttgatatgttagcagagccagatgattcgatggaaattcctgtccctaatattcct
gaattagatgaacatgaaattctaagtagtgaaaaagaattacttggtttttacgttaca
ggtcatccattaagcaaatacagtgaaattctgagtaactacacgacatcaacaactgtt
aaaatttccgaaatgaatgatcgtgagggtataaaatgtggtggaataattaaaagtatt
caacgaaaaattactcaaaaaggagcacattgggcaattttagagcttgaagatctatat
ggtacaattgagtgcttagtttatagcagaacactagaagaagcagaaatgaatggcgta
gaatttgccgaagacaaattaatttttgttgaagcattgacgcaaaaacgtgatgaaaat
gctcgtgtcaatttaaccgcccaaaaaataattcctcttgattttgttatggcacaaaac
actaatgagattcacctgcatttatatgaaggaagcgcaacaactgaaaaaattactaag
cttaagaatctttgtaataattaccccggtgaaactgaagttattttagctgcaactctt
agcagtggggaaattgtttttattgaggcttcaagtaaaatgaaaatatctgttgatgaa
gattttttaacccaaattagagatattttaggggaaaaacgttaccgacttaaggctgat
ttaacagtacctaaaccaaaaaataacttttatcgtaagaaaagtgatagttaa
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