Lentisphaerae bacterium WC36: LJT99_11740
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Entry
LJT99_11740 CDS
T10936
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lbac Lentisphaerae bacterium WC36
Pathway
lbac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LJT99_11740 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbac03400
]
LJT99_11740 (xseA)
Enzymes [BR:
lbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LJT99_11740 (xseA)
DNA repair and recombination proteins [BR:
lbac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LJT99_11740 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DUF4238
PH_DAAF9
Motif
Other DBs
NCBI-ProteinID:
UDQ97150
LinkDB
All DBs
Position
complement(2723712..2725040)
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AA seq
442 aa
AA seq
DB search
MNLKNDIWSVSDVNRAIRDIIENSFMPFWISGEVGTLNIHSSGHVYMTLKDNKSQLKVVF
FKGASQARAINLQVGMAIEIFGNLTVYEVRGEYQFNAKNIRIAGVGSLQQQFEELKRKLY
NEGLFEQSLKKSLPKIPKCIGVISSSDGAAVRDFLQVAERRFPKVNIKIFPAQMQGEGAG
ISVKRGLEYFNKSKDVDVIVITRGGGSMEDLWAFNEELLARSVVNSKIPVVSAIGHEIDF
TIVDFVADVRAATPSAAAEIIVPELNILKQNIANGEKLLLQNLKYALDNAKQRLRYLANS
QLFREPKYALQFKQQQIDELSIALEHNFDEVMKNYQHRLKLVSQSLSLKTVQNILMKNQQ
DLHILQNRLTECYSYALTNQKQRLKIAETKIKAFNPEAIINRGFAVITSEDDGTVLTSVA
DFKHNQSVSAKLKDGSVKFKVR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaaaatgacatttggagtgtgagtgacgttaatagggcaattcgtgatatt
attgagaatagctttatgccattttggattagtggtgaagttggaacgttaaatattcac
agctctggacatgtatatatgacacttaaagataacaaatcacaattaaaagttgttttt
tttaaaggtgcttcgcaagcccgtgcaattaatttgcaagttggaatggcgattgaaatt
tttggaaatttaactgtttatgaagtgcgaggagaatatcaattcaatgccaaaaatatt
cgcatcgctggagttggttcattacaacagcagttcgaagaattaaaacgtaaattgtat
aatgaaggattatttgaacaaagtttaaaaaagtcattgcctaagattccaaaatgtatt
ggcgtgatatcttcttctgatggtgccgcagttcgagattttttacaggttgctgaacgt
agatttcctaaagttaatattaaaatttttccagctcaaatgcaaggtgaaggtgctgga
ataagcgttaaacgtggacttgaatattttaataaaagcaaggacgttgacgttattgtt
ataacacgtggtggcggttcaatggaagatttatgggcttttaatgaagaacttttagct
cgtagtgttgtaaatagtaaaataccagtcgttagtgcgataggtcatgaaattgatttt
accatagttgactttgttgctgatgttagagccgcaacaccgtctgctgctgctgaaatt
attgttccagaattgaacattttaaagcaaaatattgcgaatggagaaaagttattactg
caaaatttaaagtatgcccttgataatgctaaacaacgattgaggtatttagcgaattca
caattatttcgcgaaccaaaatatgcgctacagtttaagcaacagcaaatagatgaacta
agtattgctttagagcataattttgatgaagttatgaaaaattatcagcatcgattaaaa
ttggtatcgcaatctttgagcttaaaaacggttcaaaatattctaatgaaaaatcagcag
gatttacatattttacaaaaccgtttaactgaatgttattcttacgctttgacgaaccaa
aagcaacgcctcaaaattgctgagacaaaaattaaagcttttaatcctgaagcaatcatt
aatcgtggttttgctgtgataacttctgaagatgatggaacagttctaacttctgttgcg
gattttaaacacaatcaaagtgttagtgcaaaacttaaagatggtagcgttaagtttaag
gtgcgttaa
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