Lentisphaerae bacterium WC36: LJT99_12230
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Entry
LJT99_12230 CDS
T10936
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lbac Lentisphaerae bacterium WC36
Brite
KEGG Orthology (KO) [BR:
lbac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LJT99_12230 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbac03019
]
LJT99_12230 (rnc)
03009 Ribosome biogenesis [BR:
lbac03009
]
LJT99_12230 (rnc)
03036 Chromosome and associated proteins [BR:
lbac03036
]
LJT99_12230 (rnc)
Enzymes [BR:
lbac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LJT99_12230 (rnc)
Messenger RNA biogenesis [BR:
lbac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJT99_12230 (rnc)
Ribosome biogenesis [BR:
lbac03009
]
Eukaryotic type
90S particles
RNase
LJT99_12230 (rnc)
Prokaryotic type
rRNA processing factors
LJT99_12230 (rnc)
Chromosome and associated proteins [BR:
lbac03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LJT99_12230 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
UDQ97245
LinkDB
All DBs
Position
2843126..2843848
Genome browser
AA seq
240 aa
AA seq
DB search
MKDIEKLKYHINYQFKQKKLLKEALTHRSYAVEKGLKYDNQRLEFLGDAVLEIIITEHLF
NKYTTLPEGELTKMRSAIVQGDTLADIARAIKLGDFIFLGKGEQGAKGHSRNSTLADAFE
ALIGAMYLDGGNEVAKKFILQAIDAHLESPAELLLSLNPKGILQEFCQSKWGSAPFYPLL
SVEGPDHDKTYTVAVAVNDNMIAKGIASKRKTAESVAAKAALKVLNKEGEVTSWQLENSN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatcgaaaaattaaaatatcatattaattatcaattcaaacaaaaaaaactt
cttaaagaagcactgactcatcgctcttacgcggttgaaaaaggtttaaagtacgacaac
cagcgacttgaatttttaggagatgcggtcctagaaattatcatcaccgagcatcttttt
aataaatataccacacttcctgagggtgaattgactaaaatgcgttcggcaattgtgcaa
ggtgacactttagctgatatagctcgcgcgataaaattgggagacttcattttcttaggc
aaaggagaacaaggagctaaaggacatagccgtaattctactttagccgatgcctttgag
gcattgattggggcgatgtatcttgatggcggcaatgaagttgcgaaaaagtttatttta
caagcgatcgatgcgcatttagagtcgcctgcagagttacttttatcattaaaccctaaa
ggtattctacaggaattttgccaaagtaaatggggttcagctccattttatccactatta
agcgtggaaggtcctgaccatgataaaacttataccgttgcagttgcagtaaatgataat
atgattgcaaaaggtattgcctcaaaacgtaaaactgccgaaagcgttgcagcaaaagca
gcgttaaaagttctaaataaagaaggcgaagtgaccagctggcagcttgaaaacagcaat
taa
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