Lycium barbarum (goji berry): 132598406
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Entry
132598406 CDS
T09483
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132598406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132598406
Membrane trafficking [BR:
lbb04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
132598406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
HEF_HK
Prominin
Use1
MSC_0620_UU052
Lips
MCPsignal
OmpH
ZSWIM1-3_C
Motif
Other DBs
NCBI-GeneID:
132598406
NCBI-ProteinID:
XP_060167236
LinkDB
All DBs
Position
6:121439927..121445279
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AA seq
324 aa
AA seq
DB search
MASRNRTILFRKYRDALRSVRIPAGSSPSTSSGHGSGPVIELATTSLLNPNRSYAPLSTE
DPGTSSNGPVTVGLPPAWVDVSEEITGNVQRVRTKMAELAKAHAKALMPSFGDGKEDQHR
IEALTHEITDLLKRSEKKLQRLSAAGPSEDSNVRKNVQRSLATDLQSLSMELRKKQSTYL
RRLQQQKEGPDGVDLEMNLNGSHSGRDDDDLDDLGFSEHQMAKLKKSEAFTVEREREIQQ
VVESVNDLAQIMKDLSVLVIDQGTIVDRIDHNIQNVASTVEDGLKQLQKAERSQKRGGMV
MCATVLVIMCFIMLVLLILKEIIF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaaatagaacgattttgtttagaaagtatagagatgcgttgagaagtgtt
cggatccctgccggttcttccccctccacgtcatcgggtcatggtagtgggcccgttatc
gaattggctacgacgtcgttgcttaatcctaatagatcttatgctcctcttagtaccgaa
gatcctggaacatccagtaatggtccagttacagtaggtctaccgccagcttgggtggac
gtgtcagaagaaatcacgggaaatgtgcaacgggtacgaacaaagatggctgaactagcc
aaagctcatgctaaggctttaatgccatcatttggagatggtaaggaagatcagcatcgt
atcgaggctcttacccatgaaatcactgatcttctcaaaagatcggaaaagaaattacaa
agactttctgcagctgggccttctgaggattcaaatgttaggaaaaatgtacagcgctct
cttgctacagatcttcaaagcctatccatggagcttcgcaaaaaacagtctacttatttg
aggcgtctccagcagcagaaagagggtccagatggagttgacttggaaatgaacttaaat
gggagccattctggaagggatgatgatgatttagatgacttgggatttagtgagcatcag
atggccaagctaaagaaaagtgaggcattcacagtcgaaagagagagagaaatacagcag
gtggttgaatcagtgaacgaccttgcccaaattatgaaagatctgtcagttctggtgata
gaccagggtactatcgtggataggatagaccacaatatccaaaatgttgcatcaacagtt
gaggacggccttaaacaactgcagaaggctgaacgaagccagaaacgtggtggaatggtc
atgtgtgcgacagttctagttatcatgtgctttataatgctggtcctcttaattttgaag
gagataatattctga
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integrated database retrieval system