Lycium barbarum (goji berry): 132598494
Help
Entry
132598494 CDS
T09483
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132598494
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132598494
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132598494
Protein phosphatases and associated proteins [BR:
lbb01009
]
HAD phosphatases
Fcp/Scp phosphatases
132598494
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132598494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
132598494
NCBI-ProteinID:
XP_060167391
LinkDB
All DBs
Position
6:complement(122546442..122555941)
Genome browser
AA seq
659 aa
AA seq
DB search
MAKEEAIAVKDAVHKLQLCLLEGIKDENQLFSAGSLLSLSDYQDVVTERSIANMCGYPLC
SNSLPSERPRKGHYRISLKDHKVYDLHETYMYCSTNCVVSSRTFAGSLQDERSSTLNPAK
LNEVLKLFEGLHLHSTEDVKENGDLGSSKLKIQEKLDVKGGEVSLEEWMGPSNAIEGYVP
QRDRIVNPALLKDVNRGSKNRHAGLQNEKNMILNEIDFSSIIITQDEYSISKSPAPVNAV
SNKEALQTKTRNEVRHDVSVLGKQVEALQLHSGEETEKLDKNNRCFKVDNSGEVSSGPSQ
HDVKNKSVEVLNISDGGRKCASDGAHDKQLLKSSLKSSNSKKMARSVTWADENTDEGTGN
KTESSSKISEDENQAYGGSGFTDMEEDDDAYRFGSAEACAAALSQAAEAVASGSDIPDAV
SKAGIIILPPPQEVDEAIHQEKDEVLDTEPAPLKWPRKPGMPNYDVFESEDSWYDSPPKG
FNMTLSPFATMFNSLFTWISSSSLAFIYGHDENNNEEYLSINGREYPCKIVLSDGRSTEI
KQTLAGCLARALPGLVADLRLPVPISTLEQGMGLFLDTMSFVDPLPAFRMKQWQLIVLLF
LDALSVCRLPTLTPYMTGRRTSFPKVLDGAQISTAEYEIMKDIIIPLGRVPQFSMQSGG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaagaagccatcgctgttaaagatgctgtccacaagttgcaactctgtctt
cttgaaggcattaaagatgaaaaccaactcttttctgctgggtctttgctgtctctgagc
gattatcaggatgtagtaactgaacgatcaatagcaaacatgtgtggttatcctctttgc
agcaactccctgccttctgaaaggcctcggaaaggacattacagaatatcattgaaggac
cataaagtttatgatcttcatgaaacatacatgtactgttcaacaaattgcgttgtcagt
agtagaacatttgctggtagcttgcaagacgaaagaagctctacattgaatccagcaaaa
cttaatgaagtcctgaaattatttgagggattgcatttgcattccacagaggatgtgaag
gaaaatggtgacctaggatcttccaagttgaagattcaggaaaaattggatgtaaagggt
ggtgaagtttcactggaagagtggatgggtccatctaatgcaattgaaggctatgttcca
cagagagatcgcattgtgaatccagcactgttgaaagacgttaacagaggatccaagaat
aggcatgccggactccaaaatgagaaaaacatgatacttaatgagattgacttttccagc
attataataactcaagatgagtatagcatttcaaaatctccagctcctgtaaatgctgtc
tctaataaagaagccctccaaacgaagacaaggaacgaagttaggcatgatgtttctgta
ttggggaagcaagttgaggccttgcagttgcattctggagaagaaacagaaaaactggat
aagaacaatagatgttttaaggtggataactctggagaagtgtcttctggtccttcccaa
catgatgtcaagaacaaaagtgttgaggtgctaaatatttcggatgggggaagaaaatgt
gcatcagatggtgcacatgataaacaattgctcaaatcttctctaaaatcctcaaattcc
aagaaaatggctcggtcagttacttgggctgatgaaaatacggatgaaggtactggcaat
aaaacagagagttcatccaaaatatcagaagatgagaatcaagcttatgggggatcaggc
tttacagacatggaagaggatgatgatgcatatcgatttggatctgcagaagcctgtgca
gcagcactaagccaagcagcagaggctgttgcctcaggttctgatatccctgatgctgtg
tccaaagctgggattataatattgccacctccacaagaagtggatgaagcaatacatcag
gagaaggatgaggtgcttgatacagaaccagctcctttaaaatggccaagaaaaccaggg
atgccaaattatgatgtttttgaatcggaggactcttggtatgatagtccacccaagggg
tttaacatgactctgtcacctttcgctacaatgtttaattccctcttcacatggatatca
tcatcgtccttggcatttatatatgggcacgacgaaaacaataatgaggagtatttatct
atcaatggaagagaatatccttgcaaaattgtgttatctgatggccggtcaactgagatc
aagcagactcttgctggctgtcttgctcgagcattgccaggattggttgctgaccttagg
ctgcctgtaccaatatcaactttagagcaaggaatgggtctcttcttagatacaatgtct
tttgtggacccactccctgcattccggatgaagcagtggcaacttattgtacttctgttt
cttgatgctctttccgtatgtaggttacccacactgactccatatatgacagggcgaagg
acttcgtttccaaaggtgcttgatggtgctcagataagcacagcggaatatgagatcatg
aaagatataattattccactaggtcgagtgcctcagttctcaatgcaaagtggaggctaa
DBGET
integrated database retrieval system
