KEGG   Lycium barbarum (goji berry): 132598590
Entry
132598590         CDS       T09483                                 
Name
(RefSeq) uncharacterized protein LOC132598590 isoform X1
  KO
K22611  squamous cell carcinoma antigen recognized by T-cells 3
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132598590
   03036 Chromosome and associated proteins [BR:lbb03036]
    132598590
Spliceosome [BR:lbb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    132598590
Chromosome and associated proteins [BR:lbb03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    132598590
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_PRP39_C RRM_1 TPR_14 HAT_Syf1_CNRKL1_C Lsm_interact UTP6_C NRDE-2 xRRM HAT_Syf1_M
Other DBs
NCBI-GeneID: 132598590
NCBI-ProteinID: XP_060167535
LinkDB
Position
6:124461019..124482977
AA seq 850 aa
MAESETLDSSAHPPQDNPTVNEDQDMVDAHKSTDLSDSGSDSESDSEDEAQQNAQIQALE
TDLLNNPSNYDSHVQYIKALRKQGDIEKLRQAREAMSAIFPLSSEMWQEWIKDETSLCSG
PDALPAIEKLFERGVSDYLSVALWCDYLSFVQEHDQSVSTLSAAGISKARNLFERALVAA
GLHVAEGSKIWELYREFEQAIFLTIDETDADSREKQVQRIRNLFHRQLSVPLADLSSTLI
TYKAWEAEQGAHLDVDSSNLDGLSPHVASSYQKALDMMNARTHLENQISHKVAPESERLQ
HYMAYLKFEQSLGDPARIQILYERAVAEFPISSELWLDYTHYMDKTLKTSSLVRDIYKRA
ARNCPWVGEMWVRYLLCLERGRASEDELSAVFEKSLQCTFSSFEEYLDVFLTRVDGLRRR
LSSLASGADSRDYIIIRETFQRASDYLSPHLKNTESFLRMYRYWARLESTLGKDLVAARG
VWESLLKISGSVLEMWLGYITMETEMGNINEARSLFKRCYSKRFPGTGSEDICNSWIRFE
REYGALDDFDLAVKKVTPRLEELQLFKLQEAKNVSVSADDRDNSSRKNVREKRKPASNLS
EEQSPAKRQKDKAKNVKIISEDSKDQAKGTGKVKNTKPDVAASKPASGIKNENKVVSSGK
PQQYNDQCTAFVSNLNLKANYDDLRRFFSDVGGVVAIRILNDKFTGKSRGLAYVDFSDDE
HLAAAVAKNKQTLLGKRVSIAKSDPKGRKKGSAAQGASSRQSDGANQTTENSEAGAKDSA
EGSEGKGLQPPSYRRASNIQLKGKNTFAMPRAVRPLGGVDKDKTKTKETDAVEDENPKSN
DEFRKMFIKS
NT seq 2553 nt   +upstreamnt  +downstreamnt
atggcggaaagtgaaaccctagattcctctgcacatccacctcaagacaatcctaccgta
aacgaggaccaagacatggttgacgcccataaatccactgacctttcggattcgggttcc
gactccgaatccgattcagaagacgaggcacagcagaatgcacaaattcaagccctagaa
actgacctcttaaataacccttccaattacgactctcatgttcaatacataaaagcttta
aggaaacaaggagatatcgagaagcttagacaagcaagggaagccatgagtgctattttt
cctttgagttcagagatgtggcaggagtggataaaagacgagacctctctttgttcagga
cctgatgccctccctgcaattgagaagctatttgaacgtggggtgtctgactatctgtct
gttgctttgtggtgcgactacttaagttttgttcaagagcatgaccaatcagtcagtaca
ctttctgcagctggaatttcgaaggcaagaaatctctttgagcgtgcccttgttgctgct
ggtctgcatgttgctgaaggcagcaagatatgggaattatatagggaatttgaacaagct
attttcctcactattgatgaaactgatgcagactcaagagagaagcaggtccagcgaatt
aggaatttattccatcgccagttgtctgtccctcttgctgatctaagttcaactctcatc
acatacaaggcttgggaagcagaacagggagcgcatcttgatgtagactccagtaacttg
gatgggctttcgccacatgttgcctcctcatatcaaaaggccctcgacatgatgaatgct
aggactcatcttgagaatcaaatatctcataaagttgcacctgaatcagaaaggcttcaa
cactatatggcttacttaaaatttgagcagtcgttgggggatcctgcgaggatacagatc
ttatatgagcgtgctgtagctgagtttcctatatctagtgaactctggcttgattatact
cactacatggataaaaccttgaagacctccagtcttgttcgggacatttacaaaagggcg
gcgaggaactgtccctgggttggagaaatgtgggtgcgatacttgctgtgtcttgaacgc
ggtcgtgcttctgaggacgaactatctgcagttttcgagaagtccttacagtgcactttc
tcaagctttgaagagtatcttgatgtatttctcacgagagttgatgggttaaggcggagg
ttgtcttcattggcgtctggagctgacagcagagattatataattatacgggaaactttt
cagcgtgcatcagattatttgtctccacatctgaagaatacagagagttttttgcggatg
tatagatattgggcccgcttagaatcaactctggggaaagatctagttgcagctcgtggt
gtctgggagagcctgcttaaaatcagtggatctgtgctagagatgtggctagggtacata
accatggaaactgagatgggtaatattaatgaagcccgatccctctttaagagatgctac
agtaaacggttccctgggactggctcggaggacatatgcaattcgtggattcgtttcgag
agagagtatggtgcacttgacgactttgatcttgccgttaaaaaggtcactcctcgcctt
gaagagctgcagttattcaagctacaagaagctaagaacgtcagtgtgtcagcagatgat
agagacaattcttcgaggaaaaatgtgcgtgaaaagaggaagccagcatcaaatttaagt
gaagaacaatctcctgctaaacgtcagaaagataaagctaagaatgtcaaaatcatttct
gaagatagtaaagaccaagcaaaaggcacaggcaaggtaaaaaatacaaaaccagatgtg
gctgcgagcaaaccagcgagtggaatcaaaaatgaaaacaaagttgtctcttctggcaaa
cctcagcagtacaatgaccagtgtactgcatttgtatctaaccttaacctcaaggcaaac
tatgatgacttacgtagattcttcagcgatgttggaggagtggttgctatacgaatatta
aatgacaagttcactggaaagtcaaggggattggcttatgtggatttctcggatgacgaa
cacctggcggcagctgtggcaaaaaacaagcagacattgcttgggaagagagtgagcatt
gctaagtcagatcccaagggcagaaagaaaggaagtgctgctcagggtgcgtcttcaaga
caaagtgatggtgctaatcaaactactgagaattcggaagcaggtgccaaggattctgct
gaaggttctgagggaaagggccttcaacctcctagctatcggcgggcatctaatatccag
ctcaaaggtaagaatacattcgcaatgcctagagctgtcaggccgcttggtggggttgac
aaagataaaaccaaaacaaaagaaactgatgctgttgaagacgaaaatcctaaatccaat
gatgaatttcggaaaatgttcatcaaatcttga

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