Lycium barbarum (goji berry): 132598674
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Entry
132598674 CDS
T09483
Name
(RefSeq) COP9 signalosome complex subunit 5-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132598674
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132598674
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132598674
03036 Chromosome and associated proteins [BR:
lbb03036
]
132598674
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132598674
Peptidases and inhibitors [BR:
lbb01002
]
Metallo peptidases
Family M67
132598674
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132598674
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
132598674
BRISC complex
132598674
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
132598674
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
132598674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
DUF4778
UPF0172
Motif
Other DBs
NCBI-GeneID:
132598674
NCBI-ProteinID:
XP_060167663
LinkDB
All DBs
Position
1:complement(155490412..155501607)
Genome browser
AA seq
420 aa
AA seq
DB search
MSLTSVKMTEEVWLTCLSHALSTETEEIMGLLLGDTQHSKNGSVTALIWGALPQPRCDRR
KDRVETNPEQLTAASVKAERMTLATGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
AGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKQQNHMLRPISLSPVHKNSIIDLESSLSS
ADTSRAGSRIESLEQDTGDSRAAALSSKGGARSTDLGNFFANVDNRVGENRNTNSLSNAI
TDVDPMDMSESMQEAMHRSNLEMSGAEYIRKEIPLLVLPSSSLLNLDAPLHSFTDLQRVL
FEEERTAYSQAVVTNMREAKVHPLAFIHHTSTYQASMCKLMEYCLSPAISALQDQLRENE
IRLKMLTEESKVLETEIVRGEPNTSSPRRGSASLGQRGDLYSPTELRSVSGSSSRSRKAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacgagtgtgaaaatgacagaggaagtgtggttaacatgcctaagtcatgca
ttgtctactgaaactgaagaaataatgggccttcttcttggtgacactcagcactcaaaa
aatggtagtgtgactgcacttatatggggagcgctgccacagccacgttgcgacaggagg
aaggaccgcgttgagaccaatcctgagcagctaactgctgcatcagtcaaggctgagaga
atgaccctggcaacaggaagaacaacaagagtgattggctggtatcactcacatccccac
attacagtgctcccttcccatgttgatgtccgcacacaagctatgtatcaacttctggat
gctgggtttattgggctcatattttcatgttttagtgaagatgcacagaaggttggaaga
attcaagttattgcatttcagtccttggatggaaagcagcagaatcacatgttgaggcct
atatctctttcccctgtacataaaaattctattatagaccttgaatcatctttaagttcc
gcagacacatctagagctggttcaaggatcgagagtcttgaacaagatactggtgattca
agagctgcggctttatcttctaagggtggggcaagatcgacggacttgggcaatttcttt
gctaatgttgataatagagttggagaaaaccgtaacaccaacagtcttagtaatgcaatc
actgatgtagatccaatggacatgtcagaaagtatgcaagaagcaatgcatcgatcaaat
ctggagatgagtggtgcagaatatatcagaaaggaaatccctcttcttgttctgccatcc
tcgtctcttctcaatcttgatgcacctttgcactcattcacagatctgcaacgcgtatta
tttgaagaagaacgaactgcatatagtcaggctgttgtaacaaatatgagggaagcaaaa
gtgcacccactcgctttcattcatcacacatccacgtatcaggcttctatgtgcaaatta
atggagtactgcttaagtcctgccatcagtgcccttcaggaccagttgagagagaatgaa
attcggctaaagatgctaactgaagaatccaaggttttggaaacggagatcgtaagaggg
gaaccaaatacaagttctcctcgtcgaggtagtgcttcattgggtcaaagaggagacttg
tacagtccaactgagttaagaagtgtttctggttcaagtagccggagcagaaaagcgtct
tag
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