Lycium barbarum (goji berry): 132598921
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Entry
132598921 CDS
T09483
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132598921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132598921
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132598921
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132598921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
132598921
NCBI-ProteinID:
XP_060168057
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All DBs
Position
1:complement(155948439..155950353)
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AA seq
275 aa
AA seq
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MSLLPKSDSIHIREVWNDNLEEEFDLIREIVDDYPFIAMDTEFPGVVLRPVGNFKNSNDY
HYQTLKDNVDLLKLIQLGLTFSDEYGNLPKCGTDKYCIWQFNFCDFNPNEDVYANDSIEL
LRQSGIDFKKNIENGIDGKRFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKILTCQDLP
DTQAGFFNLINMYFPVLYDVKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFKKLKENFFSGSMEKYVGVLYGLGVVENGQSVH
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgccaaaaagcgattcgattcatattcgagaagtttggaacgacaatcta
gaagaagagttcgatttgatccgagaaatcgttgatgattatccgtttatcgcgatggat
acggagtttccaggagttgttcttcgacctgttgggaattttaagaacagtaacgattat
cattaccaaacattgaaggataacgtggatttgttgaagttgatccagttggggctaacg
ttttctgatgaatatgggaatttgcctaagtgtggaactgataaatactgcatttggcaa
ttcaatttctgtgattttaacccgaatgaggatgtttatgctaacgactcgattgagttg
ttgagacagagtggcattgatttcaagaagaacatagaaaatggaattgatggtaagagg
tttggtgagcttttaatgtcttcaggaattgtgctgaatgataatgtgtattgggttaca
tttcatagtggttatgatttcgggtacttgttgaagatcttgacatgccaggacttgcct
gatactcaggcaggtttcttcaacctgatcaacatgtactttcccgtgctttatgatgtt
aagcatttgatgaagttctgcaacagccttcatggtggattgaacaagcttgcagagctg
ttggaggttgagagagttggtgtttgccatcaggccggttcggatagcttgctcacagct
tgtacttttaagaagttgaaagagaacttctttagtggttcaatggagaagtatgtcggt
gtcttgtatggtctaggtgttgttgagaatggacagagtgtccattga
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