KEGG   Lycium barbarum (goji berry): 132598979
Entry
132598979         CDS       T09483                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132598979
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132598979
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    132598979
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 POLH-Rev1_HhH PTCB-BRCT LIG3_BRCT IMS_HHH UBM Borealin
Other DBs
NCBI-GeneID: 132598979
NCBI-ProteinID: XP_060168147
LinkDB
Position
6:130591284..130609297
AA seq 1123 aa
MEPSRSANSGSNSKRTSNSNSNQSNKKKKTNQKTLGMAWGANSRSASRPCFNSSPFSNFG
SYMAVKNQKLHEQFDAEASSTSLSGPSSSKPIFHSVSIFVDGYTVPSSQELRGYMLKHGG
RFENYFSRRRVTHIICSNLPDSKVKNLRSFSRGLPVVKPTWVLDSVAANKLLNWVPYQLD
QLASEANNQPKLSAFFMKNIAVSDDAATCSTGQATSRVESPLSYSGPIEDPISFEEWQSA
EDLKPCTLEFKEDLVQENYNIDRVEESSCGMAMQELSDAASGDGSHAPFSAPSSPHNDGS
ACSDWTSDPVKEGPSNSKIPRSPNQGHSTLVDPNFVENYFKYSRLHFIGTWRNRYRKRFP
SSPGGFRCTSSGPSSSATANKTIIIHVDMDCFFVSVVIRKRPELKDKPVAICHSDNPRGT
AEISSANYPARGYGVKAGMFVRDAKSRCPHLVILSYDFEAYEEVADRFYNILHKYCNKVQ
AVSCDEAFVDATDSGVEDIQAFVSVIRKEILEATGCTASAGIAGNMLMARLATRIAKPDG
QCYIPAEKVEEHLCELPVKALPGIGHVLEEKLNRRQITTCGQLRMIPKETLQKDFGSKTG
TTLWNYSRGIDDRLVGMIQESKSIGADVNWGVRFKDLKDVQHFLLNLCKEVSLRLQGCGV
IGRKFTLKIKKRRSDAGEPVKYLGCGVCDNLSHSVTVPMATDSVDVLERIVSQLFTTSHI
DVEDIRGMGLQVSKLETADSSKQGKEKYSIRSWLTSASAKTGHQKGADADNGKNSIGERQ
AQLQGDPSTPFIEISAASPSGTAGFGQSGTLPPMNELDIGVIESLPPEVFSEINDMYDGK
LAHFIIENRSKGVSEKENISSVCPAAPDEAFAAHEEQQYNEEEIQVVSFPNKLFGDMKSE
PMSDASVPNPDVVVNAPVSGGISLMPTSLSQVDTSVFEELPEELRTDILELLPAHRNNES
SLDASLVCSDNRNSSPSISSIDLWVGNPPEWVEIFKASNCQILRVLAEMYQRAGAKKQLS
AILQRTMSQIYILPDVSTDGWAEAVSCLCELIKQYLKLKISADIEEVYICSCLLRRLTAR
SKIFLDVYNDLLPHFQKGILGVCICLYFGVIGQASLHCKCWLD
NT seq 3372 nt   +upstreamnt  +downstreamnt
atggaaccgtcacggtcagcgaactcgggttccaattcaaaacgaacttcaaattcaaat
agcaatcaaagtaacaagaagaagaagacgaatcaaaagaccctaggcatggcttggggt
gccaattctcgttctgcttctcgtccttgttttaatagttcacctttctccaatttcggc
agttacatggccgtgaagaatcaaaagcttcacgagcagtttgatgcggaggcatcaagc
acttctctcagtggtccaagctcttcaaaacctatatttcatagtgtttccatttttgtt
gatggatacacggttccttccagtcaggaacttcgaggatatatgttgaagcatggaggc
cgttttgaaaattatttttctaggcgtcgtgttactcatataatctgtagtaatcttccc
gacagtaaggtcaagaatttaaggtcctttagcaggggacttccagtagtcaaacccaca
tgggtgttggattctgttgctgcaaataagcttctgaattgggttccttatcagcttgat
cagcttgcaagtgaagctaataaccagcctaagctttctgctttctttatgaaaaacatt
gctgtttctgatgatgcagcaacatgttcaactggccaagcgacatctagagttgagagc
ccattgtcatattctggaccaattgaagatcctatatcctttgaagagtggcaatctgca
gaagatttgaagccttgtactctagaatttaaagaagatctagtgcaagaaaactacaat
atagatagagttgaagagtcaagttgtggcatggcaatgcaagaactgagtgatgctgca
agtggagatggaagccatgctccattttcagcaccttccagtcctcacaatgatggatca
gcttgtagcgactggacgagtgatcctgttaaagagggaccatcaaattcaaagattcct
aggtctcctaatcagggacattcaactctagttgatcctaattttgtggaaaactacttt
aagtattctaggttgcatttcattggtacctggagaaaccggtatcgtaaacgatttcct
agctcccctggtgggtttagatgcacaagttcaggccctagttcttcagccacagcaaat
aagacgatcattattcatgtggatatggattgcttttttgtgtctgtggtcattaggaag
cgccctgagttgaaggataaacctgttgccatttgccattcagataatccacgcggaaca
gcagaaatatcgtcagcaaattatcctgctaggggttatggagtaaaggctggaatgttt
gtcagagatgccaagtcacgttgccctcacctagtcatactttcttatgactttgaagct
tatgaggaggttgctgatcgcttttataacatcttgcacaagtactgcaacaaagtgcaa
gccgtaagttgtgatgaagcttttgtagatgccactgattctggagtagaggacattcaa
gcttttgtctcagtgattagaaaggagattcttgaggcaacaggctgtactgctagtgct
ggtatcgctgggaatatgcttatggctcgtcttgctactaggattgcaaaacctgatggg
cagtgttacattcctgctgagaaggtggaggagcacctgtgtgaacttccagtaaaagca
cttcctggaattggtcatgtgttggaagagaagttgaataggagacaaatcacaacttgt
gggcagctgcgtatgattcccaaggaaactctccagaaggactttggttctaaaaccggc
actacgctatggaactatagtagagggatagacgatcggttggttggcatgatacaggaa
agcaaatccataggtgcagatgttaactggggcgtgaggttcaaggatctgaaagatgta
caacattttctgttaaacctttgcaaggaggtttcattacgtttgcaggggtgtggagtg
ataggccggaagtttaccttgaagataaagaaaaggaggagtgatgcaggggagccagta
aagtatttgggctgtggtgtttgtgataacttgagccattctgtcacggtgccaatggct
acagatagcgttgatgtgcttgagagaatcgtttcacagctttttactacttcacacatt
gatgtggaggacataagaggcatgggattgcaggtctcaaagcttgaaactgcggatagt
tccaaacaagggaaagagaaatattccatcagatcttggctcacttctgcctctgctaag
acgggtcaccaaaaaggtgctgatgcagataacggtaaaaacagtattggtgaacgacag
gctcagttgcagggtgatccaagtacacctttcattgaaataagtgcagcttcgccctcc
ggtactgctggttttggacagagcggaactcttcctcctatgaacgagcttgatatagga
gttatagagtctcttcctcctgaggtcttttcagaaattaatgacatgtatgatggaaaa
ttggctcattttattattgaaaatagaagcaaaggtgtatcagaaaaagaaaacatatct
tctgtttgccctgctgcaccagatgaagcttttgctgctcatgaggagcagcagtataat
gaagaggaaatccaagtagtctcttttcctaataagctttttggtgatatgaaaagtgag
ccaatgtctgatgctagtgtacccaatccggacgtggttgttaatgctcctgtctcggga
ggcatcagtctaatgcccacttctctaagtcaagtagacacctcggtttttgaagaattg
cctgaggagttgagaacagatatacttgaactccttcctgcacacaggaacaatgaatct
tcactagatgcttcattggtctgttctgataatagaaacagtagtccttctatttcaagc
attgatttgtgggttgggaatccaccagaatgggttgaaatattcaaagccagcaattgt
cagattttgcgcgttttggcagagatgtatcagagagcaggagcaaagaaacagttatct
gctatattgcagaggactatgtctcagatttatattctccccgatgtcagcactgatgga
tgggctgaggctgttagttgcttatgcgagcttatcaagcagtatctaaaattaaaaatt
tcagctgatattgaagaggtttacatttgttcttgccttttaagaaggttaactgcaagg
tcaaaaattttcctagatgtttacaacgacttgcttcctcattttcagaaaggaatccta
ggagtctgcatttgtctgtactttggcgttattggtcaggcctcactccactgtaaatgc
tggttggattga

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