KEGG   Lycium barbarum (goji berry): 132599246
Entry
132599246         CDS       T09483                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lbb03016]
    132599246
Enzymes [BR:lbb01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     132599246
Transfer RNA biogenesis [BR:lbb03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    132599246
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 132599246
NCBI-ProteinID: XP_060168523
LinkDB
Position
6:134750448..134756397
AA seq 692 aa
MDETLTDQSPAAIAAESAGQAPSVDGGGVSEEYRSPEELVAKAIAPVKREYLRPPPCRPS
NNNDSSVGVQNDDAAEAKSAHIVKEKKSKRQIKRDRQKELKSPLHICPVVAKSGKVSACP
YNDKCRFSHDLEAFKAEKPTDIEGSCPFLVYEGPCPYGVGCRFAGTHRDDVSAQTENLPV
KSSEVNFFNKDTQKLLWKNKMKFPKAEATLKLLRLKGNPKDKTLADTEENGQVVPKEPAT
DTKINSSEVAADSIPPSISPEDDLDENNLADDIRPLKKAKSSVNEICSSQVSNGSGVQGE
VLGSNCDVNKSEPTADAVTDSDKSLKLHHREKKLIDFRDKLYLAPLTTVGNLPFRRVCKV
LGADVTCGEMAMCTNLLQGQASEWALLRRHSSENLFGVQICGAYPDTVTKTVELIEQECS
VDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSVVEAASLTVDTPVTIKVRTAYFEGKNR
IDSLIADIGNWGASAVTIHGRSRQQRYSKLADWDYVYQCVRRAPKSLQVLGNGDVFSYLD
WNKHKTECPELSTCMIARGALIKPWIFTEIKEQRHWDITSGERLDILKDYARFGLQHWGS
DSKGVETTRHFLLEWLSYTCRYVPVGLLDVIPQRINWRPPSYYGRDDLETLMASDSAADW
VRISEMLLGKVPAGFSFAPKHKSNAYDRAENG
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggacgaaaccctaacggaccagtcgccggcggcgattgcggcggaaagtgcagggcaa
gcaccttccgttgacggaggaggagtgagtgaagaatatagaagcccagaagagttggta
gctaaagcaatagcacctgtaaaaagagagtatcttcggcctccaccttgtagaccttct
aacaataatgatagcagtgttggagtacaaaatgatgatgcagctgaggccaaaagtgct
catattgttaaggagaagaaatccaaacgccaaattaagcgcgatcgccaaaaggaacta
aaatctccattgcatatctgtcctgtggtggccaaatcaggaaaagttagtgcgtgccca
tataatgacaaatgccggtttagtcatgatttggaagcttttaaagctgagaaaccaact
gatatagagggtagttgccctttcctggtttatgaagggccatgcccgtatggagtgggt
tgtaggtttgcagggacacacagagatgatgtttcagctcaaactgagaatttgccggta
aagagttctgaagtaaattttttcaataaggacactcagaaacttctgtggaaaaacaaa
atgaagtttcccaaggctgaagccactctcaaacttcttagacttaagggcaatcctaaa
gataaaacattggctgatacagaggaaaatggccaagttgtgccaaaagagccagccact
gacaccaaaataaacagcagtgaagttgctgctgacagtatccctccttccatttcacca
gaagatgatttagatgaaaataatttggctgatgatattagacctttaaagaaggcaaag
tcatctgtcaatgaaatttgttcttcccaagttagcaatggttcaggtgtccagggggaa
gttcttggcagcaactgtgatgtgaataaatcagagcctactgctgatgcggttacagat
tctgataaaagcctaaaattgcaccaccgtgaaaaaaagcttattgattttagagacaaa
ctctatcttgcgcctttgaccacagttgggaatctgccttttcggagagtttgcaaggtg
ctcggagctgatgttacatgtggtgagatggcaatgtgcacaaatcttttgcagggccaa
gcatctgagtgggcactgctaagacggcattcatctgagaatttgtttggtgttcagatt
tgtggggcatatccagacactgttacaaagactgttgagcttatagagcaagaatgctct
gtggatttcattgatattaacatgggatgccctatcgatattgtagttaacaagggtgct
ggatcagctcttcttacgaaaccaatgcgaatgaagagtgtagtagaagctgcttcttta
acagttgatacgccggtaactatcaaggtaagaactgcttattttgaggggaaaaatcgc
attgattctctaatagcagatattggtaattggggtgcaagtgcagtaaccatacatggt
agatcacgtcaacagcgctacagtaagcttgctgactgggattacgtctaccaatgtgta
cgaagggcccctaagtctttacaagtccttggaaatggtgatgtattttcttatttagac
tggaacaagcacaaaactgagtgccctgagctttctacgtgtatgattgctcgaggtgct
ttgataaagccgtggatatttaccgaaatcaaggaacagaggcactgggacattacatct
ggggagcggctagatatcttgaaggattatgcacgatttggccttcaacactggggttcc
gattcaaaaggagtggaaacaacaaggcactttttgttggagtggcttagttacacttgt
cggtatgttccagttggcctgttagatgttattccacaaagaataaattggcgaccaccc
tcatactacggtagggatgacctcgagacactaatggcctctgattctgctgctgactgg
gtaaggatctccgagatgttacttggcaaggttcctgctggcttttcgtttgcaccaaaa
cacaagtccaatgcttacgacagggcagagaacggttaa

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