Lycium barbarum (goji berry): 132599329
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Entry
132599329 CDS
T09483
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03082
ATP-dependent chromatin remodeling
lbb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132599329
03083 Polycomb repressive complex
132599329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbb03036
]
132599329
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132599329
Histone modification proteins
HAT complexes
HATB complex
132599329
HDAC complexes
Sin3A-HDAC complex
132599329
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132599329
PRC2.2
132599329
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132599329
Heterochromatin formation proteins
Other heterochromatin formation proteins
132599329
Chromatin remodeling factors
NuRD complex
132599329
NuRF complex
132599329
NuRF complex (fruit fly)
132599329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
DUF6922
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
132599329
NCBI-ProteinID:
XP_060168635
LinkDB
All DBs
Position
6:complement(135985272..135989431)
Genome browser
AA seq
404 aa
AA seq
DB search
MAEEEISAAGGETEQEVEEEFSVWKKNTPLLYDLVVCHALEWPSLTVQWLPSPTVNDGAF
AVHKLILGTHTSDDFPNFLMVANVHLPRNPASGLEHNLINPQIPKVEIVQKIHVDGEVNR
ARCIPQKPAVVAAKTSSSEVYVFDSSKQPLDHEGGSCNPDVRLRGHDKEGYGLSWSPFKE
GFLLSGSNDRKICLWDVTAMPQDKVLMAHHTYEEHEDVVEDVSWHPKNENLFGSVGDDCR
LIIWDLRTNKSQHSVLVHEKEVNYLSFNSYNEWVLATASSDSTVGLFDMRKLSTPLHVFG
SHTDEVFQVEWDPNHETVLASSGGDRRLMVWDLNRIGDEQLEGEAEDGPSELLFSHGGHK
AKISDFSWNKNEPWVISSVAEDNTVQIWQMAESIYRDDDDNVDC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagaaatatcggcggctggtggagaaacagaacaggaagttgaagaggaa
ttctccgtttggaagaagaacacgccgttactgtacgacctcgtcgtctgtcatgcactt
gaatggccttctctcaccgttcaatggcttccctcacccaccgttaacgacggtgctttt
gccgtccacaaactcattctcggaactcacacctccgatgatttccccaacttcctcatg
gtcgctaatgttcatctgccacgtaatcctgcttctggacttgaacacaatctcattaat
cctcaaatccctaaggtagagatagtacagaagatacatgttgatggagaagtgaatagg
gcgagatgtataccacagaagccagctgtagttgcagcaaagactagtagttctgaagtt
tatgtctttgactcttctaaacagcccctagatcatgaagggggatcttgtaacccagat
gttagacttagagggcatgataaagaaggttatggcttgtcttggagcccatttaaagag
ggttttcttttgagtggttcaaatgatcgtaagatttgtttgtgggatgtaactgcaatg
cctcaagacaaagtgcttatggcccatcatacgtatgaggagcatgaagatgtagttgag
gacgtgtcatggcatccaaagaacgagaacttatttggttccgtcggagatgattgtcgt
ctgatcatttgggacttacgcacaaacaagtcccaacactcagttttagtgcacgagaaa
gaggtgaattatttatctttcaactcgtataatgagtgggttcttgctacagcatcgtca
gatagtactgttggtctgttcgacatgcgaaagctgagcactccgttgcatgtgttcggc
agtcatacggatgaggtattccaggtagaatgggatcctaatcatgagactgtactggca
tcttcaggtggtgacagaaggttgatggtctgggatcttaacaggattggtgatgagcaa
ttggaaggggaagctgaagacgggccctctgaacttcttttctctcatggtggtcataaa
gcaaagatatctgacttttcatggaacaagaatgagccatgggtcatttcaagtgtggca
gaagacaatactgtccaaatctggcagatggctgagagcatctaccgtgatgacgatgac
aacgtcgactgctga
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integrated database retrieval system
