Lycium barbarum (goji berry): 132599340
Help
Entry
132599340 CDS
T09483
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132599340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132599340
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
132599340
Ubiquitin system [BR:
lbb04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
132599340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-B_UBE2O
UQ_con
SH3-C_UBE2O
Motif
Other DBs
NCBI-GeneID:
132599340
NCBI-ProteinID:
XP_060168646
LinkDB
All DBs
Position
6:complement(136128428..136137376)
Genome browser
AA seq
1154 aa
AA seq
DB search
MEAGRHHDAEPTTNANEYSNLIEGDSLANGASFDPKVRSECKPGEILQNLENVSYIYRQD
VVKSKTDEKIGIVTEVAGDSDSDSSLTDDEDEDEDDGEEDDDDDDGGGVHYDDDDDDGDS
NTEEDRDNNEKAEETDDGNKDRSNYKNDPLIADHVRVLWMDQSESTESINNVIVVDRGFL
HGDYVAAASDPTGQVGLVVDINISVDLLAHDGSMFKNVSSRDLKRVRDFTVGDYVVLGPW
LGRIDDVFDNVTVMFDDGSVCKVMKADPIRLKPVGRNGLEDGHFPFYPGQRVKASSSSVF
KNSRWLSGLWKANRLEGTVTKVTVGSVFIYWIASAGFGPNSSTTPAEEQNPKNLKLMSCF
SHASWQLGDWCLLPSSSFALDKQLSKLQLSDSTKTVSESSQSFADCDSEVVNLEESTGNS
ECMENDVESSVDGNCETLEHDSLAESSTCANSLSVPKESGQESWPLHRKKIRKVVVRRDK
KARKKEENFERALLIVNTRTSVDVAWQDGKIGRGLESTSLIPIESPGDHEFVAEQYVIEK
AADDADDANDVRRVGVVKSVNAKERTASVRWLKLVTRAEDPKEFDKEEVVSVYELEGHPD
YDYCYGDVVVRLLPVSLPAKVGAVVKSTEESENLLVPTEAKEDKQKNSRCNEAEAAPSDD
TCSEFSDLSWVGNITGLRDGDIEVTWAHGMISLVGPQAIYVVDRDDDESIAAGSNVGDDA
ASWETIEDHEREVLGNVEEELGTTNATDISIEDDDGAMATEDSGRNGALAIPLAALGFVT
RLASGIFSRGRKQTDSSSLDSRSEDEEREGALARIYTGDESWSQRSGDLDNSPRLPAAGK
GEQHDTMEVTELDIIEANLKPGIGNSSDQRDNQTYSFKRFDITTGPYDHHFLGTSGQNNA
GRKWLKKVQQDWNILQNNLPDGIYVRVYEDHMDLLRAVIVGAYGTPYQDGLFVFDFHLPP
EYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPSSSSILQVLVSLQG
LVLNSRPYFNEAGYDKQVGTAEGEKNSLSYNENTFLLNCKTMMYLMRKSPKDFEELIREH
FRMRGYYILKACDAYMKGFLIGSLRKDASVSSNNSANSNSVGFKLMLAKIVPKLFLALKE
IGVECEEFKHLHQL
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggaagctggccgacatcatgatgctgagcccaccacaaatgcaaacgaatatagcaat
ttgatagaaggcgattctttagcaaatggggctagctttgatccaaaagttagatcagaa
tgcaagccgggggagattctccagaacttagagaatgtttcctatatatatagacaagat
gttgtgaaaagcaaaactgatgagaagattgggatagtcaccgaggttgctggtgactca
gattcagatagcagcttaactgatgatgaagatgaggatgaggatgatggagaagaagac
gatgacgatgatgatggtggtggtgttcattatgatgatgatgatgatgatggtgattcc
aacacagaagaggatagggataacaatgaaaaggctgaggaaactgatgatgggaacaaa
gaccgtagtaactataagaatgatccgcttatcgcagaccatgttcgagtcctctggatg
gatcagtctgagtcaaccgagagtattaataatgtcattgttgtcgacagaggatttcta
catggtgattatgtcgctgcagcttctgatccaacaggtcaagtaggactggtggttgat
atcaatatatccgtagatttgttagcgcatgatggatctatgtttaaaaatgtctcatct
agggatttgaaacgtgttcgggattttacagttggtgattatgttgtccttggcccttgg
ttgggtaggattgatgatgtttttgataatgtcactgtgatgtttgatgatggttctgta
tgtaaagttatgaaggctgacccaatacgtcttaaaccagttggtaggaatggccttgaa
gatggacattttcctttctatcctggtcagcgtgtaaaagcaagctcatcatcagttttc
aagaattccagatggttatctggcttgtggaaagcaaataggttagaaggtacagtaact
aaagttactgttggttctgttttcatctactggattgcatctgctggatttggacccaat
tcctccactactccagctgaagaacagaatccgaagaacttgaaactgatgtcctgcttt
tctcatgcaagctggcaactaggtgactggtgtcttcttccttcatcatcttttgccttg
gacaagcaattgtcaaaattacaacttagtgactccaccaaaactgtatcagagtcttct
caatcttttgcagattgcgattcagaagttgtcaatttggaggaatcaacagggaatagt
gaatgtatggaaaatgatgtggaatcttctgtggatggaaattgtgaaactttagagcat
gattcccttgcagagtccagtacatgtgctaattcactgtcagttcccaaggaatcaggc
caagagtcatggccccttcatcgtaaaaagatccgcaaagttgtggttaggagagataaa
aaggcacgtaagaaagaggaaaattttgaaagagctcttctaattgtgaatactaggact
tctgttgatgttgcctggcaggatggaaaaataggaagaggtttggaatctacatccttg
atccctattgagagccccggagatcatgaatttgttgctgaacagtatgtcatagagaaa
gctgctgatgatgctgacgatgctaatgatgttaggcgtgttggggttgtgaaaagtgtt
aatgcaaaggaacgtacagcttctgtgaggtggttaaagctagttaccagggcagaggac
cccaaggagtttgacaaagaggaagtggtcagtgtatatgagcttgaggggcatcctgac
tatgactattgttacggtgacgttgttgttcgtttgttacctgtttctctaccagcaaaa
gtgggtgctgttgtgaaatctacagaagaatcagaaaatttgttggttccaactgaagcc
aaagaagataagcaaaagaattcgagatgcaatgaagcagaagccgctccaagtgatgat
acttgttccgaattttcagatctctcttgggttgggaatatcactggactcagagatgga
gacatcgaagtcacgtgggctcatgggatgatatccctggttgggcctcaagcaatttat
gttgttgatcgtgatgatgatgagtctatcgcggccggaagtaatgttggtgatgatgca
gctagctgggaaacaattgaagatcatgaaagggaggtcctggggaatgtagaagaggaa
cttggaacaacaaatgctactgacatcagtattgaagatgatgatggtgccatggccact
gaagattcaggaaggaatggggctctggctattcccctggctgcactaggatttgtgacc
aggctggcctctggaatattttccaggggccgcaaacagactgattcttcgagtttagat
tccagaagtgaagatgaagaaagggagggtgcattggccagaatatacactggcgatgaa
tcatggtctcaaaggtctggagaccttgataattccccaaggctacctgctgcaggaaag
ggagaacaacatgacactatggaagtgacagagttggacatcattgaagctaacttgaag
ccaggaataggaaattcctcagatcaacgtgataaccaaacgtatagttttaaacgcttt
gatatcacaacgggtccttatgatcatcattttcttggtacaagtggccagaataatgct
gggaggaagtggcttaagaaagttcaacaagattggaacatccttcagaataacctgcca
gatggaatatatgtacgtgtttatgaagatcacatggatcttctaagggcagtgattgtt
ggagcatatgggactccttaccaagatggcttattcgtctttgatttccaccttccacct
gagtaccctgatgttccaccatcagcatattatcattctggtggctggcggataaatcca
aacctgtatgaggaagggaaggtttgtctcagccttttaaatacttggacgggcagaggg
aatgaggtctgggatccttcatcctcaagtatacttcaagtcctagtttcacttcaaggg
ctagtcttgaattccaggccatattttaatgaagctggttatgacaagcaagttgggaca
gctgaaggagaaaaaaattcactatcatacaacgaaaataccttcttattgaactgcaag
acaatgatgtatctgatgaggaagtctcctaaggattttgaagagcttatcagagaacac
tttagaatgcgtggttactacatcctcaaggcctgtgacgcttatatgaaaggattcctt
attggctctctcagaaaagatgcttccgtaagcagtaacaacagcgctaattcaaattca
gttggtttcaagctaatgctggctaagattgtaccgaaacttttcttggctctgaaagaa
ataggagtggagtgtgaagagttcaagcatctccaccaattgtag
DBGET
integrated database retrieval system
