Lycium barbarum (goji berry): 132599415
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Entry
132599415 CDS
T09483
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132599415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132599415
Membrane trafficking [BR:
lbb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
132599415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
132599415
NCBI-ProteinID:
XP_060168767
LinkDB
All DBs
Position
6:complement(137309691..137327820)
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AA seq
1708 aa
AA seq
DB search
MSGSQTLGGPSRCGWVLGPSLDKIIKNVAWRKHSQLVAACKSALDKLDSVVDDPVDPASC
TPLYGLSPSDADFFLQPLIMALDSASPKVVEPALDCSFRLFSLGLIRCEIDPPTPSSNPS
HIFRLIDSVCKCGALGDEAIELSLLRVLLSAVRSPYVLARGDCLVHIVRSCYNVYLGGMN
GTNQICAKSVLAQMTIIVFSRVEENSMMVDFKTVAVAELLEFTDRNLNEGTSVQFAQNFL
NEIVDAKSKEGIAESKLCLQLENDNSEKKGEPIDGEPSEGADLSGYSKIREDGFMLFKNL
CKLSMKFSSQEHADDNILLRGKVLSLELLKVIMDNAGPIWRSNERFLNVIKQFLCLSLLK
NSALSVMTIFQLLCSIFKNLLSKYRSGLKSEIGIFFPMLILRVLENVLQPSFLQKMTVLG
LLEEISKDPQIIIDVFVNYDCDVDAPNIFERTVNGLLKTALGPPPGSTTTLSPVQDITFR
SESVKCLVTIIKSMGMWMDQQLKVGDPNLDKVSDHEVSEATISVGEEGNIDYELHPEANS
EFSGAAALEQRRAHKLEIQKGVSLFNRKPSKGIDFLMSTKKIGNSPEDVASFLKNTTGLN
PTIIGDYLGEREEFPLKVMHAYVDSFNFEGMDFGESIRYFLRGFRLPGEAQKIDRIMEKF
AERYCKCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLP
EDYLGALYDQIVKNEIKMKADSSVPQNKQGNSLNKLLGLDGILNLVWKQREEKPLGANGV
LVRHIQEQFKTKSGKSESIYYVIADPAILRFMVEVCWGPMLAAFSVTLDQSDDKNATSQC
LLGFRHAVHITAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDTMKTIMSIAIEDGNH
LHEAWEHILTCLSRFEHLQLLGEGAPSDSSFFTTSSSESEEKTLKSAGFPSLKKKGTLQN
PTVAAVVRGGSYDSATVGANSPALVTPEQINNFISNLNLLDQIGNFELNHIFAHSQRLNS
EAIVAFVRALCKVSMSELQSPTDPRVFSLTKIVEVAHYNMNRIRLVWSHIWSVLSEFFVA
VGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSNSAEIRELIV
RCISQMVLSRVNNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREYFRYITETET
LTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVSNEKNKNNDSSIPVAEK
EASDGLIFTDKDDYMSFWEPLLTGLSRLTSDPRSAIRKSALEVLFNILKDHGHLFPRLFW
INVFKSVIYPIFSTEAQVKYDQSSFKSRCIPPDGCLWDSETSVVAAQCLVDLFVNFFDIV
RSELPSVVSIMVGCIIGSGKDPAATGVASVMRLAADLRGKFCEEEWKVIFLALKEASYST
LPNFLKLLRTMDNIEISTSQSENDMETSSGAGLVNDESEDDNLHTAGYVVSRMKDHIAAQ
LRVIQVASDLYKMCRQSVSADTVNALLGIYSAVTSHAHQLKSEKAVQVKLQKACSILEIP
EPPLVFFENESYQNYLNFLHGLLVNNSSFVEEKNIEPELVGVCEEILRVYLDCAGLNSVK
RKPDDKAIYQWNLPLGSAKKEELVARTPLVLSVLRILCSWQTDSFRKYISQLFPLMIDLV
RSEHSSGEVQRELSHFFQSCIGPIIMKL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttctcaaacgctaggcgggccttcccggtgtgggtgggtactgggtccgtct
cttgataagatcatcaagaacgtcgcctggaggaaacactcgcagctcgtggccgcctgc
aagtccgctctcgacaagcttgattctgtggttgacgaccctgtcgatccagcttcctgc
acccctctctatgggctctccccttccgatgccgatttcttcttgcaacccctcatcatg
gctctcgactctgcctctcccaaagttgttgaacctgcactcgattgctccttcaggttg
ttctccttgggcttgatccgctgcgagatcgacccccccacccccagctctaacccctcc
catattttccgccttatagattccgtctgtaagtgcggcgctcttggggatgaagcaata
gagctttcccttctcagggtcttgctctctgccgttcgatctccctacgtgcttgccaga
ggtgattgccttgtccacattgttaggtcctgttacaatgtctatctcgggggcatgaat
ggcaccaatcagatctgtgccaagtcagttcttgctcagatgacgataattgttttctcc
agagtggaggagaattccatgatggtcgacttcaagaccgtcgctgtagctgaactcttg
gagttcactgataggaatttgaacgagggtacctctgtacagttcgcccagaatttcctc
aatgagattgtggatgccaagtccaaagaaggcatcgctgaatccaagttgtgtttgcag
ttggagaatgacaacagtgaaaagaagggtgagcccatcgacggggaacccagtgaagga
gctgatctgagtggttacagtaagattagagaggatggcttcatgctcttcaagaatttg
tgcaagttgtctatgaagttttcatcacaagagcacgcagatgacaatattttgctaagg
gggaaagtactatcactggagctcctaaaggttatcatggataatgctggtcctatttgg
cgctcaaatgagaggtttcttaatgttatcaagcaatttttgtgcttgtcgttgttgaag
aacagtgcactatctgtgatgacgatctttcaacttctttgttcaatattcaagaactta
ttatcaaaatatagatctgggttgaaatcagaaattggaatcttcttccccatgctgatc
ttacgtgtgctggagaatgtgcttcagcctagtttcttgcagaagatgactgttttgggt
ttgctggaggagatatctaaggatcctcagattatcattgatgtatttgtcaactatgac
tgtgatgttgacgctcctaacatatttgaaaggactgttaatggtcttcttaaaactgca
cttggtccgcctcctggttccactactacgctgtccccagtccaagatattacatttcgt
tctgaatctgtgaaatgcttagtcacaattataaagtcaatggggatgtggatggaccag
caactgaaggtcggggatcccaatcttgataaggtgtctgatcatgaagtgtcagaagcc
actataagtgtcggtgaagagggtaatatagactatgagctgcatccggaagcaaattct
gaattttctggtgctgctgccttggagcaacgccgtgctcataaattagaaatacagaag
ggcgtttcactgttcaacagaaaaccttcaaaggggattgatttcttaatgagcaccaaa
aagattggcaattccccagaagatgtagcctcttttctgaagaatacaaccggattgaat
ccaaccatcattggtgattatttgggtgaaagagaggagtttcctctgaaagttatgcat
gcatatgtcgattcttttaattttgaaggcatggactttggtgaatcaatcagatatttc
cttcgagggttcagattacctggtgaagctcagaagattgaccgtataatggagaagttt
gcggagcgctattgtaaatgcaatcctaactcttttaccagcgcagatacagcttatgtg
cttgcttactctgtgataatgctcaatacagatgcacataatagcatggtgaaagataag
atgacaaaagctgattttatccggaacaatcgagggattgacgacgggaaggatttacct
gaagattatttgggtgctctctatgaccaaattgtgaaaaacgagataaagatgaaagcg
gattcttctgtgccgcaaaacaagcaggggaacagtctgaataagctgttgggcttggat
ggtatactgaatctagtatggaagcagagagaggaaaaaccactgggtgcaaatggagtt
ctcgtgaggcatattcaagagcagtttaaaacaaaatctggaaaatctgagtctatctat
tatgtcattgcagatccagctatattgagatttatggtggaagtttgctggggtcccatg
cttgcggctttcagtgtcaccctagaccagagtgatgataagaatgccacttctcagtgt
ttactagggtttaggcatgctgtgcacattacagctgtgatgggtatgcagacgcagaga
gatgcttttgtcacctctatggcaaagttcactaatcttcactgtgctgccgatatgaaa
caaaaaaatgttgatacaatgaaaacaataatgtcgattgccattgaagatgggaatcat
cttcatgaagcgtgggagcatatattgacatgtctatctcgatttgagcatctgcagttg
ctgggggagggcgcgccatctgattcctccttttttactacctcgagctctgaatctgag
gaaaagacattgaagtcagctggatttccatcactgaagaaaaaagggacactgcagaat
ccaactgttgctgctgttgttcgaggggggtcatatgacagcgcaaccgtcggagctaac
tctccagcattggtgactccagaacagataaataacttcatttcaaacttgaacttactt
gatcagatcggcaactttgaactaaatcacatatttgctcatagccaaaggctgaacagt
gaagcaatagtagcttttgtgagggccctttgcaaagtttcgatgtcagaactacagtct
ccaacagatccccgtgtatttagccttacaaaaattgttgaagttgcgcactataacatg
aaccgtatcagattagtgtggtcccatatatggagtgttctttcagagttctttgtggct
gttggtttgtcagaaaatctttcagttgcaatttttgtcatggactcattgcgacaactt
gctatgaagtttttggaacgagaggaactggcaaactacaactttcagaatgaattttta
agaccatttgttattgttatgcagaaaagtaattctgctgaaatcagggagttgatagtt
cgttgtatttctcaaatggttctgagtcgtgtcaataatgtaaaatctgggtggaagagt
gtttttatggtttttacagctgctgctgcagatgaaaggaaaaatattgtgttgcttgcc
tttgaaaccatggaaaagatcgtacgggaatattttcgttacatcactgagactgaaaca
ctgacttttacggattgtgttagatgcctcattaccttcacaaacagcagattcaacagt
gatgttagcctcaacgctattgcttttctccgtttctgtgctgtcaaacttgcagaaggg
ggccttgttagcaacgagaaaaacaaaaataatgattcatctattccagtggccgaaaaa
gaagcttcagatgggctaatcttcacagataaggatgattatatgtctttctgggagcct
ctgctcacagggttatcaagattgacttcagatcctcggtcagctattagaaagagtgca
ttggaagttctgttcaacatcttgaaggaccacggtcatctcttcccacgcctattctgg
attaatgtctttaagtctgtaatctacccaatattcagtacagaagctcaagtaaagtat
gaccagtcttcatttaaatccagatgcataccaccggatggatgcttatgggactctgaa
acttctgtggtggcagctcaatgtttggtggatttatttgttaatttctttgatattgtg
aggtctgaattacctagtgtagtctctataatggttggatgtataataggttctggcaag
gatcctgcagccactggggtagcttctgtaatgcggttggcagctgatttgagaggcaaa
ttctgtgaagaggaatggaaagttatctttctagctctgaaagaagcttcatattccact
ctacccaattttctgaagcttttgagaacaatggacaatattgagatatctactagtcag
tcggaaaatgatatggaaacatcttctggggctggattggtaaatgatgaatcagaggat
gacaacctgcatactgcaggatatgttgtttcaaggatgaaggatcatatagcggctcaa
ttgcgcgtcatacaggtggcgtctgatctctacaagatgtgtcggcaatcggtatcagct
gatactgtcaatgccctccttggaatctattcagctgtcacttctcatgcccaccaattg
aaatctgagaaagctgtacaagtaaagctgcaaaaagcatgttctatccttgagatacca
gaacctccgctggtgttttttgaaaatgagtcctaccagaattacctcaattttttgcat
gggctgcttgtgaacaattcatcattcgtcgaagagaagaatatagaaccagaacttgtg
ggtgtgtgtgaagaaattctacgcgtatacttggactgtgctgggttgaactctgtcaag
aggaaaccagatgataaggcaatataccagtggaatcttcccttgggttcagctaagaag
gaagaactggtagcaaggacgcccttggttctgtcagtactacgcattctgtgcagttgg
caaacggattcttttaggaagtacatttctcagttgttcccattaatgatagatcttgtt
cggagtgagcatagctcaggagaggtccagcgtgaactaagccattttttccaatcctgt
atcggccccattataatgaaattgtga
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integrated database retrieval system
