Lycium barbarum (goji berry): 132599619
Help
Entry
132599619 CDS
T09483
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
132599619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132599619
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
132599619
Membrane trafficking [BR:
lbb04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
132599619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Imm25
Motif
Other DBs
NCBI-GeneID:
132599619
NCBI-ProteinID:
XP_060168915
LinkDB
All DBs
Position
1:156946128..156957091
Genome browser
AA seq
1030 aa
AA seq
DB search
MKDMAKFEIWFLILMVCGLWMVEAKYMVYNTSQGIVAGKLNVHLVPHTHDDVGWLKTVDQ
YYVGSNNSIQGACVENVLDSLIPALLADKNRKFIYVEQAFFQRWWRNQSPRMQNTVRQLV
NSGQLEFINGGWCMHDEAATHYIDMIDQTTLGHNYIKQQFNVTPRIGWQIDPFGHSAVQA
YLLGAEVGFDSLFFGRIDYQDREKRKAEKSLEVIWQGSKSLSSSTQIFAGAFPKNYEPPS
GFYFEVNDNSAIPVQDDVNLFDYNVQERVNDFVAAALSQANITRSNHIMWTMGTDFKYQY
AESWFKNMDKLIHYVNQDGRVNALYSSPSIYTDAKHALDESWPLKTDDYFPYADRINAYW
TGYFTSRPALKLYVRMMSGYYLAARQLEFFKGRSDTGTTTELLADALAIAQHHDAVSGTS
KQHVADDYSKRLFIGYKQAEDLVSNSLACMVESASASGCKNPQINFKQCPLLNISYCPPT
EADLAPGKKLVVVVYNALGWKRTDVVRIPVVNKNVIVQDSNGKEIESQLLPIVKASIAIR
NYYATAYVGESPTSSPKYWLAFTVTVPALGFSSYVITSGKQAVSASIPQTFYKTDGSQSD
AVEVGPGNLKLSYSANGGKFTQYFNKRNQVRSSLEQSFSYYSADDGSKDDWKDLQASGAY
VFRPNGSFPIHPEGKVPVTIIRGSLLDEVHQNINSWIYQITRVYKEKEHIEVEFTVGPIP
IDNGIGKELVTQIQTDIKSNKTFYTDSNGRDFIKRIRDYRADWNLQVNQPAAGNYYPINL
GLFLKDNNNEFSVLVDRSVGGSSLVDGQLELMLHRRLLHDDGRGVGEALNETVCALGKCM
GLTVQGKYYMRIDSLGEGAKWRRSFGQEIYSPLLLAFTEQDGDKFTKFQVPTFTGIDPSY
SLPDNVAIITLQELEDHTVLLRLAHLYEVDEDKDLSTTASVELKRLFPKRKINKIKEMSL
TANQERAEMEKKRIKWKAETPSDLRDVPRGGPVDPKKLVVELAPMEIRTFVIDLSQSLPA
AESWKSHMSL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatggcgaagtttgaaatatggttcttgattttgatggtgtgtggtttgtgg
atggtggaagcaaagtatatggtttacaatacatcacaggggattgttgcagggaagctg
aatgttcatttggttcctcatactcacgatgatgttggctggttgaaaactgtcgatcag
tactatgttggttccaacaattccattcagggtgcttgtgttgagaatgtattggattca
ttgatcccagcattgttggctgataaaaaccggaagttcatttacgttgaacaggctttt
tttcagcgttggtggaggaaccagagccccagaatgcaaaacacagtcagacagcttgtc
aactcgggtcaacttgagttcataaatgggggttggtgcatgcatgatgaggcagcaaca
cattatattgacatgatagatcagacaactctagggcacaattacattaaacaacagttc
aatgttactcctagaattggctggcaaattgacccttttggacattctgctgttcaggcg
taccttctgggagcagaggttggattcgactctcttttctttggacgcattgactaccaa
gacagagaaaagaggaaagctgagaagagccttgaggtcatatggcagggttctaagagc
ctcagttcatccacacaaatatttgctggtgcattccctaagaattatgaacctcccagt
ggattttactttgaagtcaatgataattccgccatccctgttcaggatgatgtcaacctg
tttgactacaatgtccaagagcgggtcaatgattttgttgctgctgctttgtcacaagcc
aatattactcgctcaaaccatataatgtggaccatgggaactgattttaagtaccaatac
gctgagtcatggtttaagaatatggacaagctcattcactacgtgaaccaagatggtcgt
gtcaatgccttatactcgagcccttcaatttacactgatgcaaaacatgctttggacgag
tcatggcctcttaagacggatgactatttcccgtatgcagatcgtattaatgcttattgg
actggatactttacaagtaggcctgctctcaaactctatgttagaatgatgagtggctat
tatctggcagcaagacaattggaattctttaaaggaagaagtgatacaggaacaacaacc
gaattattggctgatgccctagccattgctcaacatcatgatgccgtcagtggcacttca
aagcaacatgttgctgatgattattcgaaacgactgttcataggttacaagcaggctgaa
gatttagtgtctaattcacttgcttgtatggtggaatcagcttcagcatctggatgcaag
aatcctcagataaatttcaagcagtgcccactgttgaatataagttactgtcccccaaca
gaagctgatcttgctcctggcaaaaaattagtggttgttgtgtacaatgctcttggatgg
aaaagaacagatgttgtcagaatccctgttgtcaataaaaatgtcatcgttcaggattcc
aatggaaaagaaattgaatcacaacttcttccaatagttaaagcttcaatagcaataagg
aactactatgctacagcatatgtcggtgaatcccctacatcaagcccaaaatattggctc
gcgtttacagttactgttccagctttgggctttagctcctatgttataacaagtggtaaa
caagcagtttctgcctcaataccacagacgttctacaaaactgatggaagtcaaagtgat
gctgtagaagtggggccagggaacttgaaactgtcatattctgcaaatggaggaaagttt
actcaatattttaataagagaaaccaggttagaagctctctggagcaatcattcagttat
tattctgcagatgatggaagcaaggatgattggaaagaccttcaggcctctggagcatat
gtatttcgcccaaatggttcatttcccatccaccctgagggaaaggttccagttaccatt
atacgaggttcactgctagatgaagttcatcaaaatattaattcatggatatatcagatc
actagagtgtacaaggaaaaggagcacattgaagttgagttcactgttggccccatacct
attgacaatggaattgggaaagagctggtgactcagattcaaactgacatcaaaagcaac
aaaacattttacaccgactctaatggacgtgatttcatcaaaaggattcgtgattataga
gctgattggaatcttcaagtgaaccaacctgccgcgggaaattattatcctatcaatctt
ggacttttcctgaaagacaacaacaatgagttctcagttttggttgatagatctgtaggt
ggatccagccttgttgatggccaattggagctaatgcttcaccggaggttactccatgat
gatggaagaggtgttggtgaagcactgaatgaaaccgtctgtgctcttggaaaatgcatg
ggcttgactgtccaaggcaagtactatatgcggattgattctcttggagagggagcgaag
tggcggcggtcatttggacaggagatatattctccattgcttctagcttttactgagcag
gatggcgataaatttaccaaatttcaagttccaacctttactgggatagatccatcttac
agtctgcctgataatgttgcaataatcacccttcaggaacttgaggatcacaccgtcctc
ctcagattggctcatttatacgaggttgatgaagataaggatctatccaccacggcaagt
gtagaattgaaaagattgttcccaaagagaaagataaacaagatcaaagagatgagttta
actgctaaccaagaaagagcagaaatggagaagaaacgaataaagtggaaagcagagact
cctagtgatttgcgagacgtgccaagagggggacccgtcgatcctaaaaagctggtggta
gagctcgcccctatggaaatccgcacctttgttatcgatctcagccagagcttgccagct
gcagaatcttggaagtcacatatgtctctataa
DBGET
integrated database retrieval system
