Lycium barbarum (goji berry): 132600474
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Entry
132600474 CDS
T09483
Name
(RefSeq) hydroxyproline O-arabinosyltransferase RDN2-like
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132600474
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lbb01003
]
132600474
Enzymes [BR:
lbb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
132600474
Glycosyltransferases [BR:
lbb01003
]
O-Glycan biosynthesis
O-linked Ara type
132600474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPAT
PEPCK_N
Motif
Other DBs
NCBI-GeneID:
132600474
NCBI-ProteinID:
XP_060169650
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Position
6:complement(2972895..2988683)
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AA seq
364 aa
AA seq
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MGRVTPLSLFHLSLVSFFATYNLITMIIQYRTVGSGKWKAGGFVSSNTQLFPDPIIQMPE
NLRKPKSEKLLFHIAVTATDDPYSKWQCRIMYYWYMKKKDLPGSEMGKFTRILHSGSPDN
LMDEIPTFVVDPLPEGLDLGYVVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVNPLPNL
AYGDYPAAFPFFYIKPAEHEEIIRKFFPKENGPVTNVDPIGNSPVIIKKDLLKQVAPTWM
NISLRMKHDEETDKTFGWVLEMYGYAVASSLHGVQHILRRDFMLQPPWDLETGKKFIIHY
TYGCDYNLKGELTYGKIGEWRFDKRSYRRGPPPKNLSLPPPNVPESVVTLVKMINEATAN
IPNW
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagtgacaccactgtctctttttcatctgtcccttgtttctttctttgcaaca
tataatctgattaccatgattatacagtatagaaccgttggctctgggaaatggaaggct
ggtggttttgtgtcctcgaacactcaactatttcctgatccaattattcaaatgcctgag
aatctgagaaaaccaaaatctgaaaagttgttattccatattgcggtaaccgcaactgat
gatccttatagcaagtggcaatgccgcatcatgtactactggtatatgaaaaagaaggat
ttaccaggttcagagatgggaaaattcactcgaatcctccattcaggaagccccgacaat
ctgatggatgaaattccgacatttgtggttgatcctcttccagaaggtttggatctgggt
tatgttgtcctcaatagaccttgggcgttcgtccagtggctggagaaggctacaattgaa
gaggaatacatactaatggcagagcctgatcacatttttgtgaacccgctgcccaattta
gcttatggagattaccctgctgctttcccttttttctatattaaacctgccgagcacgaa
gagatcataaggaaattctttcccaaagaaaatggtcctgtaacaaatgttgatcccatt
ggcaattccccggttattataaagaaggatttgttgaagcaagtagcacctacatggatg
aatatttcactaagaatgaaacatgacgaagaaacagataaaacttttggctgggtctta
gaaatgtatggttatgctgtagcttcttctttgcatggtgtgcagcatatccttaggaga
gactttatgctacagccaccctgggatttggaaactggaaagaagttcatcatccattac
acttatgggtgtgactacaacttgaagggtgagctaacttacggaaaaattggagaatgg
cgatttgataagaggtcctatcgccgaggacctccacctaaaaatctatccctgcctcca
cctaatgtccctgaaagtgtggtaactctggtgaagatgataaacgaagcaactgccaac
attccaaattggtga
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