KEGG   Lycium barbarum (goji berry): 132600517
Entry
132600517         CDS       T09483                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132600517
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    132600517
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 GIP1_N UBA_Rad5 zf-Di19
Other DBs
NCBI-GeneID: 132600517
NCBI-ProteinID: XP_060169722
LinkDB
Position
6:3889499..3900475
AA seq 1042 aa
MGNKITDELVSMIRSIVGDEYTEMDIIRSLHMAKNNPEAAINIIFDTPSFKKVEIRNNNS
NSEAGSNVNSNRGVCKASGTHKLQSLDPPLSSNVSNNTGEIQESEITTVSSNEGLDTKSK
IQSEWWYVGCGEVAGMSTCKGRILNPGDEVDFTFPVEKKLSSPSPGKFGGGRGRQAAACS
EIVRFSTKACGEIGRIPNEWARCILPLVRDKKIRIEGCCKSAPNILGIMDSVLLSVRVYI
NSSMFRKSHQTSLKARSNLADDTVLHPLPTLFHLLGLSPFKKAEFTPADLYTRKRPLNEK
DSSGGPAALLRANLSKSSSSADGDKVENDESISDTDLDYIVGLADSSELEEMEPPSLLQC
ELRPYQKQALHWMTQLERGRNTDEAATTLHPCWNAYRLKDERELVVYLNAFSGDATTEFP
STLEMARGGILADSMGLGKTIMTIALLLSHSERGRSSGSQSTSQLSGENGEASNILGQSP
TFAKKTAKFSSLDKLLKHKPTLIPGGNLIICPMTLLGQWKAEIEAHSQPGALSVYVYYGQ
TRSKDAKVLARSDVVLTTYGVLASEFSTENAEESGGLLSIRWFRVVLDEAHTIKSSKSQI
SNAAAALSADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGSWAWWNKLIQKPFEEGDERG
LKLVQSILSLIMLRRTKSSTDREGRPILVLPPADIQVIYCELTEAERDFYDALYKRSKVK
FDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLANRFLKGGKET
GEGKDVPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRSSTS
GLCPVCRNTVSKQELITAPSDNRFQVDVEKNWMESSKVSALLCELKRLRSVGSKSIVFSQ
WTAFLDLLQIPLSRSNIPFVRLDGTLNQQQREKVIKKFSEEDDISVLLMSLKAGGVGINL
TAASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQVMIKRFIVKGSVEERMEAVQARKQRMI
SGALTDQEVRTARIEELKMFFA
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgggcaacaaaatcacagatgaacttgtttcaatgatacgttcaattgttggcgatgaa
tatacagagatggacataattagatcacttcacatggcaaaaaacaaccctgaagctgca
ataaatatcatttttgataccccaagtttcaagaaagtcgaaattcgcaacaataattcc
aattccgaagctggaagtaatgtaaattcaaacagaggcgtatgcaaagcttcaggaacc
cataaacttcaaagcttggatccgcctctgagttcaaatgtaagtaataatactggtgag
atccaagaatctgagattactacagtttcttcaaatgagggattggatactaagagtaaa
attcagagtgaatggtggtatgtggggtgtggtgaggttgctggtatgtcgacgtgtaaa
gggagaattttgaatcctggtgatgaagttgattttacgttccccgtggagaagaaattg
agttcaccttcacctgggaagtttggaggtggacgagggcgtcaagctgctgcgtgttct
gaaattgtaaggttttctactaaggcttgtggagagattgggcgtattccaaatgaatgg
gctcgatgtattctgcctctggtgagggataagaagattagaattgaagggtgttgcaaa
tcggcccctaatatattggggattatggactctgttcttttgtcagtcagagtgtatatt
aacagttccatgtttcgtaaaagccatcagacatcactaaaggctagaagcaatctcgca
gatgatacagttcttcacccccttccaactttgttccatttgctcggactttctcctttt
aagaaggcggaatttactccagctgatttatacacgaggaagcgacctttgaacgaaaag
gacagctctggtggtcctgccgcattattgcgtgcaaacctatccaaaagctcctcatct
gcagatggagataaagttgagaatgatgagtcaatttctgatacagatcttgactatatt
gttggtttagctgatagctcggagctagaggaaatggaaccgccaagtttgctccagtgc
gaacttcgaccctatcagaagcaggcgcttcattggatgacacaactggagaggggaaga
aacacggatgaagcagcaacaactctgcatccttgttggaatgcttaccgcctgaaagac
gagagggagcttgttgtttacttgaatgcattttcgggtgatgcgaccactgaatttcct
agtacccttgaaatggctagaggaggaattttggcagattccatggggctagggaagact
ataatgactatagctctactcctcagtcattctgaaagaggtagatcatcaggaagccaa
tctacaagtcagctgtctggtgaaaatggtgaagctagtaatatcttaggtcaatctcca
acttttgcgaagaaaacagcaaaattctctagtcttgataagcttctgaaacataagccc
acacttattcctggtggcaatctgattatatgtccaatgacactactaggtcaatggaag
gcagagattgaagcacattcacaacctggggctctatctgtttatgtttactatgggcag
acaagatcaaaggatgcaaaagtgcttgctcgaagtgatgtcgtgctaacaacatatgga
gtgttggcctccgaattttctacggagaatgctgaggaaagtgggggccttctctctatt
agatggtttagagtagtgcttgatgaggcacatactatcaaatcctctaaaagccaaatc
tcaaatgctgccgctgctcttagtgctgaccgtcggtggtgtcttactggtactcctatc
cagaacaatttggaggatatttacagtctactcagatttttgagagtcgaaccatgggga
agctgggcatggtggaacaagcttattcagaaaccttttgaggagggagatgagaggggg
ctaaagttggttcaatcaattttaagtctgatcatgttgagaagaacgaagtctagtaca
gatagagaaggcagaccaattttagttctaccaccagcggatattcaagtgatatattgt
gaacttacagaagcagagcgcgacttctatgatgcattgtataaaagatccaaggtgaag
tttgatcagtttgttgagcaaggacgggttctccacaactatgcttctatattggagttg
cttttgcgacttcgtcaatgttgtgaccatccttttcttgtaatgagtcgaggtgatacc
caagaattctctgatctaaataagcttgctaatcggttccttaagggtggtaaggagact
ggagaaggcaaggacgtcccttcacgtgcttatattcaggaggttgtggaagaattgcgg
aagggagaacagggagaatgccctatttgtcttgaagcttttgaagatgcggtcttgact
ccatgtgctcataggttatgtcgagagtgtctcttggcaagctggcgaagttctacttca
ggcctttgtcctgtttgcagaaacactgtcagtaagcaagagcttataacagccccgtca
gacaaccgctttcaggttgatgttgaaaagaattggatggagtcatcaaaagtatcagcc
ttgttgtgtgaattaaaacgtcttcgttctgttggctccaaaagcattgtttttagtcag
tggactgccttcttagatctactgcagattcctctttctcgtagtaatattccatttgtt
cgccttgatgggacgttaaaccagcaacaacgtgagaaagtaataaagaagttctcagaa
gaggatgacatttcggtgttgctaatgtcattgaaggctggtggtgttgggataaacctg
acggctgcatctaatgcttttgtcatggatccttggtggaatccagctgttgaggaacaa
gcggtcatgcgtgttcatcgtattggacaaactaagcaagtaatgatcaaacgattcatt
gtgaagggttcggttgaggaaagaatggaggcagtacaagctaggaagcaacgtatgatt
tctggtgctttgaccgaccaagaagttcggactgcaagaattgaggaacttaagatgttt
tttgcatag

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