Lycium barbarum (goji berry): 132600540
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Entry
132600540 CDS
T09483
Name
(RefSeq) tRNA dimethylallyltransferase 2
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00908
Zeatin biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
132600540
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132600540
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132600540
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
132600540
Prenyltransferases [BR:
lbb01006
]
Compound prenylation
tRNA dimethylallyltransferase
132600540
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
132600540
Prokaryotic type
132600540
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GFIT
Motif
Pfam:
IPPT
IPT
SF3a60_Prp9_C
Cas9-BH
AAA_22
nSTAND3
AAA_16
PspAA
Zeta_toxin
AAA_25
AAA_33
Hpr_kinase_C
AAA_28
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
132600540
NCBI-ProteinID:
XP_060169750
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All DBs
Position
6:complement(4383119..4390762)
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AA seq
474 aa
AA seq
DB search
METDQEHEQKTQNPNNGTTKDEIKLNPTSNSKTKVVLIMGATGAGKSKLAIDLASHFPIE
IINADSMQVYQGLDVITNKVTPQEQKGVPHHLLGTISPSVEFTARDFRDSAISIINEVWS
RNRLPVIVGGTNYYIQALVSPFLLDDSVEDAEANCFSDSQEDEQPDLEVELMSEDYDCAY
NRLKDIDPVAANRIHPNNDRKINQYLNLYARFGVIPSKLLQERTVENWGQVDNSRHDFCF
LCVNASLTTLDPFVDRRVDHMVDAGLLKEVFDIYTTNADYTKGLRQAIGVREFEPFLRRY
IPEHQKPCDESHVQTLNDQTLKQNIQQIVDSPDDNEWKTLLTEAIEQVKLNTRRLVRRQR
RRLNRLQMLFGWNIHYVDATKSILSGADDIWAVEVVKPSVGIIKSFLTGESSTENGGNVS
EEMKLKQKDLWTQYVCEACGNKVLRGAHEWEEHQKGRHHRKRISRLKKSGSLCL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcaagaacatgaacaaaaaacacaaaaccctaacaatggaacaacaaaa
gatgaaatcaagctcaaccccacttcaaattcaaagacaaaagtagtattgataatggga
gcaacaggtgctggcaaatcaaaacttgctattgatttggcttctcacttccctattgaa
attatcaatgctgattctatgcaggtttatcaaggattggatgttattaccaataaagtt
actccccaagagcaaaaaggagtgcctcatcatcttcttggtactatcagccccagtgtt
gaatttactgccagggatttccgtgactcagctatttctataataaatgaggtatggtcc
cgcaataggttgccagttatagttggaggaacaaattattatattcaggctcttgtgagt
ccattccttcttgatgattctgttgaagatgcagaggctaattgcttcagcgactctcaa
gaagatgagcaacctgatcttgaagttgaacttatgagcgaggattatgattgtgcttac
aaccgtcttaaagatattgatccagttgcagccaacagaattcatccaaataatgataga
aagataaaccaatacctgaatttgtatgcacgatttggtgttattccaagcaaacttctt
caggagaggactgtagagaactggggtcaagttgataattcaagacatgatttctgcttc
ttatgtgtgaatgcatctcttaccactttggatccatttgtcgatagaagagttgatcac
atggttgatgctggtctattgaaggaagtttttgacatctacactacgaatgcagactat
acaaaaggcttgaggcaggccataggtgttagggaattcgagccatttcttaggcgttac
ataccggaacatcaaaaaccttgtgatgaatctcatgtgcagacactaaatgatcagaca
ttgaagcaaaatatacagcagattgtggattcccctgatgataatgaatggaaaactctt
ctaactgaagcaattgaacaagtcaaattgaacacacggagactagttcgacgtcaacgg
agaaggcttaatcggctgcagatgctgtttggatggaacatacattatgttgatgccaca
aagtccatattaagtggtgctgatgatatatgggcagtagaagtggtcaaaccctctgta
ggaataataaaatcctttctcactggcgaatccagtacggaaaatggtggcaatgtttct
gaagaaatgaagttgaagcaaaaggatctctggactcagtatgtatgtgaggcatgcggt
aataaggtccttagaggcgcgcatgagtgggaagagcatcaaaagggtcgtcatcatcga
aaacgaatttcccggcttaagaagtcgggaagcttgtgcttgtga
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