| Entry |
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| Name |
(RefSeq) probable NOT transcription complex subunit VIP2 isoform X1
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| KO |
| K12605 | CCR4-NOT transcription complex subunit 2 |
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| Organism |
lbb Lycium barbarum (goji berry)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lbb00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132600853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lbb03019]
132600853
Messenger RNA biogenesis [BR:lbb03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132600853
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132600853
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:15395280..15406081
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| AA seq |
661 aa
MSGLLNSSLNGSASNLPDNTGRSFPSSFSPQSGAPSPLYHHSGSIQGLHNIHGSFNIPNM
QGALGSRNTAINNLPSSGVQQSGNNLSGGRFSSNNLPASLSQISQGNSLGHSGMTSRAGM
SVVGNAGYSNNASGVGGSIPGILPTSAAIGNRSSVPGLGVSQILGNAGPRMTNSVGNIVG
GGNIGRSIGSGAGLSAPGLASRLNMNANAGSGNLNLQGPNRIMSGALQQASPQVLSMLGN
SYPAGGPLSQNHIQAMGNLNSLGLLNDVNSNDAPFDINDFPQLGSRPSSAGGLQGQLGSL
RKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDPHQKEQLHDNALSMMQQQHFSM
GRSSGFNLGGTYSSHRPQQQLQHAPSVSNSGVSFSNINNQDLLNLHGPDVFQSSQSSYHQ
QSGGPPGIGLRPLNSSSNASGIGSYDQLIQQYQQHQGQSQFRLQQMSNLGQPYRDQSSKS
MQSQVASDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSAENLYKTFGSPWSDEP
AKGDPEFTVPQCYYAKQPPPLNQAYFSKLQLDTLFYIFYSMPRDEAQLYAANELYNRGWF
YHREHRLWFMRVANMEPLVKTNAYERGSYICFDPNTWETIRKDNFVVHYEMLEKRPALPQ
H |
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| NT seq |
1986 nt +upstreamnt +downstreamnt
atgtcagggttactcaactcttctctaaacggatcagcttcaaatcttcctgacaacacc
ggccgctcatttccttcatctttctctcctcaatctggtgcaccctcccctctttatcat
cactctggaagtattcaggggctgcataacattcatgggagtttcaacattcctaacatg
cagggggcacttggttcaagaaacacagcgataaataacctcccctccagtggtgtccag
caatctggaaataacctttctggtggtcgtttttcatcaaacaatctccccgcttccctg
tctcagatatcccaaggcaattcgcttggtcattctggaatgacaagtagagctggtatg
agtgttgttggtaatgcgggatatagcaataatgctagtggtgtaggaggttctattcct
gggattctcccaacctctgcagcaattggtaatcgaagttctgtgccaggtcttggggtg
tcccaaattttgggaaatgcaggcccaaggatgacaaactcagttggaaatatagttggt
gggggcaacattggcagaagcattggctctggtgcaggattgtctgcgcctggtcttgct
tcacggttaaatatgaacgccaatgctggttctggaaatttaaatcttcaaggacctaat
aggataatgagcggtgctcttcagcaagcctctccgcaggtactttctatgttaggaaat
tcctatcctgctggtggtccactatctcaaaaccacatccaagcaatgggaaaccttaat
tcattgggattgttgaatgatgtaaattcaaatgatgctccttttgacatcaatgatttc
cctcagttgggcagtcgacctagttcggctggaggacttcaaggacaattgggttctttg
cggaaacaagggctcagtcctattgttcagcaaaaccaggaattcagcattcaaaatgaa
gattttcctgctttaccaggattcaaaggtgggaatgctgattatgctatggatcctcac
cagaaagagcaacttcatgataatgctctttctatgatgcaacagcaacacttctcaatg
ggaagatcttcgggttttaatttggggggaacatactcatcgcatcgtccacagcagcag
ctacaacatgctccatctgttagtaatagtggtgtctccttttcaaatataaacaaccag
gatctgctgaatttgcatggtccagatgtcttccaatcatcccagtccagttatcatcaa
cagagtggtggacctcctggtattggattacggcctcttaattcttcaagtaatgcttct
ggtattggatcatacgatcagctcatccagcagtaccaacagcatcagggtcaatcccaa
ttccgtttgcagcaaatgtcgaatttaggtcagccatacagggatcagagctcaaagtcc
atgcaatcccaggttgcttctgacccgtttggtatgcttggtttgctaagtgtaatacgg
atgagtgatccagatttgacttctcttgcacttggaattgatctaacaacacttggattg
aatttgaactctgctgaaaatttgtacaagacttttggttccccatggtccgatgagcct
gccaagggagatccagaatttactgtaccccaatgttattatgcaaagcaaccaccacct
ttaaatcaagcatacttctcaaagttgcagctagatactttgttttacattttttacagc
atgccaagagatgaagcgcaactgtatgctgcaaatgaactgtataaccgcggctggttt
tatcacagagaacatcggttgtggtttatgagggttgccaacatggagcctctcgtcaag
acgaatgcatatgagagagggtcttacatttgttttgatccaaacacatgggagacaatc
cgtaaggataattttgtcgtgcactatgaaatgttggaaaaaagacctgcgctacctcaa
cactaa |
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