Lycium barbarum (goji berry): 132601339
Help
Entry
132601339 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132601339
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132601339
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132601339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_4
FANCL_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
132601339
NCBI-ProteinID:
XP_060170420
LinkDB
All DBs
Position
1:159590917..159596049
Genome browser
AA seq
372 aa
AA seq
DB search
MKGADFKWYDGFFLSMLATSIIIVAINWKRYHLCIYPLHIWIVVDYTTVFLFRLLMFVDN
GLAAGMGLDLGWQQRYTRFRGRIVVLSILALFLYPFLWAWTIIGTLWFTSARNCLPEEGQ
KWGFLIWLLFSYCGLVGIACISIGKWLTRRQAHSLRAQQGIPTSEFGVLVDMIRVPDWTF
AAAGQEMRAMGPDATSYHPGLYLTQAQTEAVEALIQELPKFRLKAVPTDCSECPICLEEF
RMGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNIRAEGSTANVLT
AARYVRSQPSSQSYLLRLQGLLRPVRTQDAGLGSEIDLASGTANSSNQVLAPHSHGNVEP
VQVVVEQPPREQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgcagattttaaatggtatgacgggttcttcctgtcaatgttagcaactagt
ataatcattgtggcgataaattggaagcggtaccatctttgtatataccccttgcacatt
tggattgtggttgactatacaacggtgtttctttttcggttactaatgtttgttgacaat
ggacttgctgctggaatgggattggatttaggttggcagcagagatatactcgctttcgt
ggaagaatagttgttctttcaattcttgccctgtttctgtatccctttctttgggcttgg
acgattattgggactttatggttcactagtgcgagaaactgtttgccagaagaaggtcaa
aagtggggtttccttatttggttgctcttcagctactgtggactcgttggcatagcttgc
atatcaattgggaagtggttaactagaagacaagcccattcattacgtgctcaacaggga
attcctacttcagaatttggggtgttggttgacatgatcagagtaccagattggactttt
gcagcagcaggacaggagatgagagcgatgggacctgatgctacttcatatcacccagga
ctttacttaacccaagctcagacagaagcagtggaagctctcattcaggaactaccaaag
ttcaggctgaaggctgttcctactgactgtagtgagtgccctatctgtttggaagagttt
cgcatgggaaacgaggttcgtggtctgccttgtgctcacaacttccacgttgaatgcatt
gatgagtggcttcggttaaatgtgaaatgccctagatgccgttcttctgtttttccaaat
cttgatctcagtgctttatccaatatccgagcagagggttcaacagccaatgtcctgaca
gcagctcggtatgtgagatcccaaccctccagtcagagctacctgctgagattgcaaggt
ttgctccgcccagtgcgcacacaggatgctggcctgggcagtgagatagatctagcttca
ggaacagctaatagcagcaaccaagtattggcacctcatagtcatggaaatgtggagcct
gtgcaagttgtggtggaacagcccccaagggagcaataa
DBGET
integrated database retrieval system
