Lycium barbarum (goji berry): 132601752
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Entry
132601752 CDS
T09483
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132601752
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132601752
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132601752
NCBI-ProteinID:
XP_060170804
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Position
1:complement(160191574..160194894)
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AA seq
405 aa
AA seq
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MATSFISLLFLLSSLLLIPSLLASSPLQNPQSVVDQVDRSINVSRRNLGYLSCGTGNPID
DCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSSNDDPVTPKSGTLRYAVIQ
NEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQGVTNIIIHGIHIHD
CKQGGNAMVRNSSQHYGWRTISDGDGVSIFTGSHIWVDHCSLSNCMDGLIDAIMGSTAIT
ISNNYMTHHDKVMLLGHSDSHVQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSANPTINSQGNRFLAPDIRFSKEVTKHEDAPESEWKNWNWRTDGDLMLNGA
FFIKSGAGASSNYAKASSLSAKPSSLISSIVSGAGALSCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcctttatttctctccttttcctcttgtcctctcttctcttaattccttcc
ctccttgcctcttctcccttacaaaatccccaatctgttgttgatcaagttgataggagc
ataaatgtgtcaaggaggaacttgggctatctctcatgtggcactggaaaccctatagat
gactgctggcgttgtgaccccaactgggaaaaaaaccgccaaaggctagctgattgtgct
attggcttcggcaagaatgctgttggtggcagagacggcaaaatatacgtggtcactgac
tccagcaacgacgatcccgttacccctaaatcgggcactctccgatatgctgttattcaa
aacgagccgttgtggattatttttgctagggatatggtcattcaactgaaagaagaactt
attatgaattctttcaagactattgatggaagaggagctagcgttcacattgcaggtggg
ccatgcataaccatacaaggtgtgaccaatattatcatccatggaatccacatacatgat
tgtaagcaaggggggaatgctatggtgaggaactcctcacagcactatgggtggaggact
atatcagatggtgatggagtctccatatttactggaagtcatatttgggtagaccattgc
tccttgtctaattgcatggatgggttgattgatgctattatggggtccactgcaattacc
atttctaacaattacatgactcaccatgataaagttatgttattgggacacagtgattcc
catgtccaggacaagaacatgcaagtaaccattgctttcaatcactttggagaaggcctt
gtccaaagaatgccaagatgtagacatggttacttccatgtggtaaacaatgactataca
cactgggaaatgtatgccattggtggtagtgctaatcccaccattaatagccagggcaac
agattccttgctcctgatattagattcagcaaagaggtgacaaagcatgaggatgcacca
gaaagtgaatggaagaattggaattggaggactgatggggacttaatgttaaatggtgca
tttttcataaaatcaggagctggagcctcttcaaactatgccaaggcttcaagcttaagt
gctaaaccttcttcactaataagttccattgtctccggtgccggcgcccttagttgccgg
aaaggttcccgttgctga
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