Lycium barbarum (goji berry): 132602390
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Entry
132602390 CDS
T09483
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132602390
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132602390
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132602390
NCBI-ProteinID:
XP_060171244
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Position
7:complement(107204449..107208206)
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AA seq
322 aa
AA seq
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MTNNIGPDVVKYKVTDNSDDPLNPKPGTLRYAMTHIKGKIWVTFERDMKIRLQKPLLVSS
FTTIDGRGVNVNIADGACLMLQRVTNVIIHGLRIHHCKAQTASTVLGPDRKIVNVGPVDG
DAIRMLTSSKIWIDHNTLFESEDGLIDVTRGSTDITISNNWFRTQDKVMLLGHDDGFLRD
KNMKVTVAFNYFGPNCNQRMPRVRHGYAHVVNNKYKGWGNYAIGGSMNPSIKSQANYFFA
PTEGKKEITWTKEGAVGEVIGNFQSVEDVFANGASFVGSGSGREAVKPNYTPGQAFQVED
GNKVKDLTRNAGALKCSSSSTC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactaataatattggacccgatgtcgttaaatacaaggttacagataatagtgacgac
cccttaaaccctaaacccggaaccctaagatatgcgatgacgcatattaaaggaaagatt
tgggtaacgtttgaaagagacatgaaaattaggctccaaaaaccccttttagttagcagc
tttaccaccattgatggccgtggagttaatgttaacattgctgatggtgcttgtctaatg
ctccaaagggtgacaaatgtgattattcatggactaagaatccaccattgcaaggcacaa
acagcatcaacagtcttgggacctgatagaaaaattgtaaatgttggtccagttgatgga
gatgcaattagaatgttgacttcttccaagatttggattgatcacaacaccctttttgag
agtgaagatggtttgattgatgtcactcgtggttctacagatattactatttccaacaat
tggtttaggacacaagacaaggttatgttgttaggtcatgatgatggattccttcgagac
aagaacatgaaagttactgtggcattcaactattttggtcctaattgcaaccagagaatg
ccaagggttcgtcatggatatgcccatgtagttaacaataaatacaagggatggggtaac
tatgcaataggaggaagcatgaacccaagcattaagagccaggccaattatttctttgca
ccaacagaaggaaagaaagagattacatggacaaaggagggtgcagttggtgaagtgata
gggaatttccagtcagttgaagatgtatttgcgaacggagcgtctttcgttggatcgggt
tctggtcgtgaggctgtgaagccaaactatacgccggggcaagcttttcaggttgaagat
ggaaataaagtcaaggacttgacaagaaatgcaggtgctttaaaatgttctagctcttct
acctgctga
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