Lycium barbarum (goji berry): 132602605
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Entry
132602605 CDS
T09483
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132602605
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132602605
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
132602605
NCBI-ProteinID:
XP_060171400
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Position
7:complement(127262889..127265237)
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AA seq
395 aa
AA seq
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MMMCKLSLLAIFPLFLIFLFNLSLAANTIYNVQNYGAKSNGKTDSSNAFLSAWTAACAST
SAATIYVPRGSYLIRNAYFSGETCKSNAITIRIDGTLLAPSDYNVIGKSGNWIKFEKVTG
VSIYGGTFDGQGAGLWACKTSGKKCPKGTTALAFYNSDKIIINGVTAQNSQMFHILVDGC
HNVKLQGVRVSAPGNSPNTDGIHVQSSSGVSIMNSRIGTGDDCISIGPGNSNLWIESIAC
GPGHGISIGSLGWKLQEARVQNVTVKTVTFTGTDNGVRVKTWARPSSGFVRGVLFQHIVM
ANVQNPILIDQNYCPNHESCPHQGSGVKISDVTYQDIHGTSATEVAVKLDCSKTNPCTGI
TLEDVKLSYKDGSAKASCVNAGGRASGFEQLTGCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgcaaacttagtctcttagcaatattcccacttttcttgatctttctcttc
aacctatcattagcagcaaataccatttacaatgtccaaaattatggagcaaaatccaat
ggcaaaacagactcatcaaatgcttttttgagtgcatggactgcagcctgtgcttctact
agcgcggccactatatacgtgccacgtggaagttacctgattcgcaacgcatacttcagt
ggcgagacatgcaagagcaacgctattactatacgcattgatggcactctcttagctccc
tctgattataatgtgattggcaagtctggaaattggataaagttcgaaaaagtcaccgga
gtttctatctatggtggaacttttgatggacaaggtgctggtctttgggcttgcaagacc
tctggcaagaaatgtcctaagggaactacggcactggccttttacaactcggataaaatc
ataatcaacggagtaactgcacaaaatagtcaaatgttccatattttggttgatggctgc
cataatgtgaagctacaaggagtgagagtctcagctccaggaaatagccccaacaccgat
ggaattcatgtacaatcatcatcaggagtcagcattatgaactcacgtattggtactgga
gatgattgcatctcaattggccctggaaattctaacttatggatcgaaagcattgcttgt
ggccctggccatggaatcagcattggaagtttaggctggaagttacaagaggcaagagtt
caaaatgtgacagttaagaccgttactttcaccggaacagataatggtgtgagagtgaaa
acttgggcaaggcctagcagtggctttgttagaggtgtcctctttcagcatattgttatg
gctaatgttcaaaacccaatcctcatagaccaaaattactgccctaatcacgaaagttgt
cctcatcagggctcgggcgtgaagataagtgatgtaacatatcaagacatacatggaaca
tcggctacagaagttgcagtgaaactagactgtagcaaaacgaatccatgtactggaata
acacttgaagatgtgaaacttagttacaaagatggttcagctaaagcttcatgtgttaat
gctggaggaagagcttctggttttgaacaacttactggctgcttataa
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