Lycium barbarum (goji berry): 132602612
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Entry
132602612 CDS
T09483
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132602612
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
132602612
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
132602612
NCBI-ProteinID:
XP_060171407
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Position
7:127547204..127550023
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AA seq
396 aa
AA seq
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MKIENPASSILLILLLSIFFTESIADICPFNVANYGAKPDGKTDSSNAFLTAWDSACGSS
KPATIYVPQGKFLVKQAHFKGKCKNKAIMFRIYGTRVAPSNYNVIGNAKNWLLFEGVDGV
SIHGGRLDGQGSGLWACKAHKKNCPRGATTLGFSNSNNVAITGLTSLNSQMFHIVINGCK
NVKLQAVKVFAPGKSPNTDGIHVQLSSEISILNSIISTGDDCVSIGPGTTNLWIQNMACG
PGHGISIGSLAKDFEEAGVQNVTVRSVIFKNTTNGVRIKTWGRPSTGFVNNVLFQHATMI
DVQNPIVIDQNYCPYNKNCPGQVSGVKVSDVTYQDIHGSSATRVAMKFDCSKENPCRRIK
LEDVNLTYKNEAAAEASCATNVAGATSGIIQPTGCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagagaaccccgcatcttctattcttctaattttacttctctccatctttttc
actgaatccatagctgatatttgtccattcaatgttgcaaattatggtgcaaaaccagat
gggaaaactgattcatcaaatgcttttttaactgcttgggactcagcttgtggctcttca
aaaccagccacaatttatgtaccacaaggaaagttcttagttaaacaagcacattttaaa
ggaaaatgcaagaacaaagccataatgtttcgaatctatggtacacgtgtggcgccttcc
aattataatgtgattggaaatgccaaaaattggcttctgtttgaaggtgttgatggagtt
tccattcatggtggtagacttgatggccaaggatctggtttgtgggcttgcaaagcccac
aagaagaattgtccgaggggcgccacaactctgggattttccaattctaacaatgtagca
ataactggactaacttcattgaacagccaaatgtttcacattgtcatcaatgggtgcaaa
aatgtgaagttgcaggctgtcaaagtttttgccccaggaaaaagcccgaatacggatggc
attcatgttcaattatcgtcggagatctcaatcttgaactcgataattagtacgggagat
gattgcgtatccatcggtccaggaacaactaacttgtggatccaaaatatggcttgtggc
cctggacatggaatcagcattggaagtttagccaaggattttgaagaagcaggggtgcag
aatgtgacagtgagatcagttatatttaagaacacaacaaatggtgtgaggatcaaaaca
tggggcagaccaagtactggctttgtcaataatgttcttttccagcacgccacgatgatt
gacgttcaaaatccaatcgttatcgatcaaaattactgcccgtataacaaaaattgtccg
ggccaggtctcaggtgtgaaagtaagtgatgtcacatatcaagatatccatggaagttca
gcaacacgagttgcgatgaaatttgattgcagtaaagagaatccatgcagaagaataaaa
ttggaagacgtaaatctcacttataagaatgaagcagctgctgaagcttcatgtgctact
aatgtggcaggagcaacttctggcattattcagcctaccggttgtttgtaa
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