Lycium barbarum (goji berry): 132602848
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Entry
132602848 CDS
T09483
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03060
Protein export
lbb04141
Protein processing in endoplasmic reticulum
lbb04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
132602848
04141 Protein processing in endoplasmic reticulum
132602848
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132602848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132602848
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lbb02044
]
132602848
Membrane trafficking [BR:
lbb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
132602848
Secretion system [BR:
lbb02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
132602848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
132602848
NCBI-ProteinID:
XP_060171624
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All DBs
Position
7:1137694..1149604
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AA seq
548 aa
AA seq
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MLITVREISSSSLCFNSFISNTKINSKQLHSLKVNRFTPICKASGISFHKKNTDNTAPSW
NLGLFQSTESCDSSVFDPLGINSGKSSWDNLVSLLSQTFESSSNTRKDKNSSARGLAAAI
EDTSIDFGDFFKGPLPGKFLKLLGFLALSRLGIYIPLGGVNREAFVGNLDENSILSTLDS
FSGGGIGRLGICSLGIVPFINAQIVFQLLAQIYPKLQELQKREGEAGRKKVLQYTRYASV
GFAVVQAIGQVLFLRPYVNDFSTEWAISSVVLLTLGSVFTTYIGERITDLKLGNGTSLLI
FTNIISYLPASFGRTVAQAYQDGNYVGLAGILVSFFLLVLSIVYVQEAERKIPLNYASRY
TGRTGGGLQKSAYLPFKVNSSGVMPIIFSTSALALPGTLARFTGVGFLRKAALGLNPGGS
FYLPTNILMIAFFNYYYTFLQLDPDDVSDQLKRQGASIPLVRPGKSTAAFIKTVLSRISV
LGSAFLAVLAAGPAVIEQATHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIE
FYDIDNKY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacagtcagagaaatttcttcttcttcactatgtttcaattctttcatttct
aacactaaaattaattccaaacagttacactctttaaaggtaaataggttcacaccaatt
tgtaaagctagtggcatcagtttccataaaaaaaacactgataatactgccccatcatgg
aatcttggtctttttcaatcaacagaaagctgtgatagttcagtatttgatccattgggt
atcaattcaggtaaatcatcgtgggataatttagtgagcttgctctctcagacattcgaa
agctcctcaaacactagaaaagacaaaaattcatcagctagagggttggcagctgcaatt
gaagatactagcattgattttggagacttcttcaaaggcccgttaccaggaaagtttcta
aagctattaggctttttggctttgtcacgactcgggatctacatacccctcggcggagta
aatcgggaggcgtttgtaggaaatttagatgagaatagtatattaagtaccttggattcc
ttttcgggtggaggcataggtcgactcggaatatgttccctaggaattgttcctttcatc
aatgcacaaattgtgtttcaacttcttgctcaaatttaccccaagctgcaagaacttcaa
aaaagagaaggtgaagctggaagaaagaaagttcttcagtatactcgttatgcttctgtc
ggatttgccgtagtacaggcaattggccaagtattgttccttcgtccttatgttaatgac
ttcagtaccgagtgggcaatttcttctgttgttctcttgaccctcggctcagtatttacg
acgtatattggggagcgaatcactgatttaaaacttggaaacggtacatcacttttgatc
tttacaaatatcatctcctacttgccagcatcctttggtaggaccgttgcacaggcatat
caagatggtaattatgttgggcttgccgggatcctagtctcattcttcctgctagtcctt
agcattgtatacgttcaggaagcagagaggaaaattcccctaaattatgcatcaaggtat
actggcagaacaggaggaggacttcaaaaatctgcatacttaccgtttaaagtaaacagt
tcaggagtaatgccgattattttctctacatcggcactagcccttcctggcactctggca
cgtttcactggtgtcggtttcctgaggaaggctgcattaggtttaaaccctggaggttct
ttctatctcccgacaaacattttgatgattgccttcttcaattactattatacattcctg
caattggaccccgatgatgtcagtgaccaattgaagcgacaaggggcctcaatcccactt
gttcgaccgggtaaaagcacagcagcattcatcaaaacggtactcagccggatatcagtt
cttggttctgcatttttggcagttctcgctgctggccctgctgtgattgaacaagccaca
cacctcactgctttccggggctttgcaggcacgtcagtgcttattctcgtcggttgtgct
acagacaccgcaaggaaagtgcaagcggagatcatatcccaaaagtacaagaatatagag
ttttacgacattgataataaatattga
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