Lycium barbarum (goji berry): 132602933
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Entry
132602933 CDS
T09483
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03030
DNA replication
lbb03410
Base excision repair
lbb03420
Nucleotide excision repair
lbb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132602933
03410 Base excision repair
132602933
03420 Nucleotide excision repair
132602933
03430 Mismatch repair
132602933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132602933
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132602933
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132602933
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132602933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_30
RCF1-5-like_lid
AAA_22
AAA_19
AAA_5
BRCT_2
RuvB_N
AAA_14
AAA_assoc_2
AAA_18
nSTAND3
Gp44_lid
KTI12
DNAX_ATPase_lid
AAA_16
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
132602933
NCBI-ProteinID:
XP_060171737
LinkDB
All DBs
Position
7:3719506..3735775
Genome browser
AA seq
1018 aa
AA seq
DB search
MSDIRKWFMKQHDKGAGNGSLSKNSAAEKPSPTSPKPENLVQEGQDTAGRRKTSKYFATD
KVKAKEEKVEEVSAKRKAQNAGGSSSVDEKPPAAKRIHKADDDDDFVLPASATGSKNVTP
SKKSVSGSGRGSARKNVVSDESDDDLKSKKSDLKPAGRGRGGRAAQTSGKGVPLDESDDD
GSAVKDTKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPD
CLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIEGRKSSKAKEL
GTAFLTEDGLFEKIRSSKKSKSAAPPESKKSVDTVVSSAKRNSQNKSDGTGSTATKILAA
KELTSVASPAKSSASPAKSRASPATRKGQTKESSLPWTEKYRPKAIVDIIGNKSLVEQIQ
RWLESWDEHFLNAASKGKGKKPNDSGAKKAVLLSGIPGIGKTTSAKVVSQLLGFQTIEVN
ASDSRGKADSKIEKGIGGSTANSIKELVSNESLSANVGRSHHQKTVLIMDEVDGMSAGDR
GGVADLIASIKISKIPIICICNDKYSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAE
GIQVNEIALEELSDRVGGDMRMALNQLQYMSLSKSVIQYDDIRQRLLSSSKDEDISPFKA
VEKLFDFNAKNLKIDQRIDLSMSDPDLVPLLVQENYLNYKPSSAGKDDDGLKRMSLIAHA
ADSIANSDLINVQIRRYQQWQLSPAGCVSSCIIPASLLHGQRQTLEQGERNFNRFGGWLG
KNSTMGKNYRILEDLHVHLLASRESYLGRANLRLDYFTLLTKKLTDPLKVLPKDEAVENV
VEFMDTYSISQEDFDNIVEISKFKGHPNLLDGVQPAVKAALTKAYKKGSNSRVIRTADLI
TLPGIKKAPKKRVAAMLEPLDEGLAEENGEALAEDEENSSETEDIDVEKKLQSDLQSLNS
KGIQVNMDLKGAGSSGGKKPSAGRGRGRGSSNNSEKGSAESSGKRGGRGSGAGAKRKR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcaggaaatggttcatgaagcagcatgacaaaggtgcgggtaatgggagt
ttgtccaagaatagtgctgcagaaaagccttctccaactagtccaaagccagaaaacctg
gtacaagaaggacaagatactgctggcagaaggaaaactagtaaatattttgctacagac
aaggtgaaggcaaaagaagaaaaagttgaggaagtatcagcaaaaagaaaagctcaaaat
gctggtggaagttcatcagttgatgagaagccaccagctgcgaaaagaattcacaaagct
gatgatgatgacgactttgtactgcctgcatctgcgacgggatcgaaaaatgtcactccc
agcaaaaagtcggtaagtggatctggaaggggatctgcgcggaaaaatgtggtaagtgat
gaaagtgacgacgatcttaagagcaaaaaatctgacctcaaacctgctggaagagggcgt
ggtggacgggcagctcagaccagtggaaagggcgtccctcttgatgaaagtgatgatgat
ggctcagctgtcaaggacaccaaatctggtggacgtgggcgtggtggtaaaggaccatct
gcagcaccaagtggtggacgaggcagaggtggtggaggacggggcggtttcatgaatttt
ggtgaaagaaaagaccctcctcacaagggggaaaaggaagtccctgaaggtgccccagac
tgtttagctggtttgacttttgtaattagtggaactctagacagtttagaaagagaagaa
gctgaggatttgattaaacgccacggtggtcgtgtcacaggatctgttagcaagaaaacg
aattatcttttatgcgatgaagacatcgagggacggaaatcctctaaagccaaggagctt
ggaactgcatttctcactgaggatggtttgtttgaaaagatccggtcatcgaaaaaatca
aagtcagctgcaccacccgagtcaaagaaatctgtggacactgttgtttcttctgcaaag
agaaattcacagaataaaagtgatggaactggaagcactgccacaaagattctagctgcc
aaagaattgacatctgttgcatctcctgccaagagtagtgcatctcctgccaagagtaga
gcatctcctgccacgaggaaaggccaaactaaagagtcttcactaccatggacagaaaaa
tacaggcccaaagctattgtagacataataggaaataagtcactggtggaacagattcag
cgctggctggagagctgggatgagcactttttaaatgcagctagtaaggggaaggggaaa
aaaccgaacgactctggtgctaaaaaagcagttctattgagcggtatcccgggtataggg
aagactacatcagcaaaggtggttagtcagttactgggtttccaaaccatcgaggtaaat
gctagtgatagtcgtggaaaggctgattcaaaaattgagaaaggaattggtggaagtact
gctaattccataaaagaacttgttagcaatgaatccctaagtgctaatgttggcagatcg
caccatcagaagactgttctgattatggatgaggttgatggcatgtctgctggagataga
ggtggtgttgccgatcttattgctagcatcaagatctcgaaaattcctattatctgcatt
tgtaatgataagtacagtcagaaattgaagagccttgtcaattattgcctaccaattgtc
ttccgaaaaccaaccaagcagcagatggcaaagaggttaaagcaagtggcaaatgctgaa
ggcattcaagtcaatgagattgctcttgaggaattgtcagaccgtgttgggggagatatg
cgtatggctctaaatcaattgcaatacatgagcctctccaagtcagtgatccaatacgat
gatataagacaacgccttctaagcagttcaaaggatgaagacatctcaccgttcaaagct
gtagaaaagctgtttgattttaacgccaagaacttgaaaatagatcaaagaattgacctc
agtatgagcgacccagatcttgtcccgcttcttgtacaggagaactatctcaattacaaa
ccaagttctgctggcaaagatgatgatggtttaaagcggatgagcttaattgcacatgct
gctgactctattgcaaatagtgacttaataaatgtacagattcgaagataccaacagtgg
caactttctccagctggttgtgtttcgtcttgcataattcctgcttctttgttgcacgga
cagagacagactcttgagcagggagaacgcaactttaacaggtttggtggctggctagga
aagaactctacaatgggaaagaattaccgaattttggaggacttgcatgttcacctactc
gcatctcgtgaatcatatttgggaagggcaaacctgagacttgactactttactcttctt
acaaagaagttgacagatccattaaaagtgctgcctaaggatgaagcagtcgagaacgtt
gtggaattcatggatacatactctataagccaggaagacttcgataatattgtggagata
tcaaaattcaagggacatccgaatcttctggatggtgttcagcctgctgtgaaagctgca
ttgacaaaggcatacaaaaaaggaagcaattcacgtgttatccgcacggcagatttaata
actcttcctggaattaaaaaagctcccaagaagcgcgttgcagcaatgctggagccacta
gatgaaggcttagctgaagaaaatggtgaagcacttgctgaagatgaagaaaactcatca
gagacagaagacatagatgttgagaaaaaattgcagtctgatctacagagtctcaactcg
aaggggatccaagtaaacatggacttgaagggtgccgggagttcaggtggcaagaagcct
tctgcaggaaggggaagaggaagaggaagttctaataacagtgagaaaggaagcgctgaa
tcctcgggtaagagaggtggccggggttctggagctggtgccaagagaaagaggtga
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