Lycium barbarum (goji berry): 132602971
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Entry
132602971 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132602971
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132602971
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132602971
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132602971
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132602971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7611
Motif
Other DBs
NCBI-GeneID:
132602971
NCBI-ProteinID:
XP_060171783
LinkDB
All DBs
Position
7:complement(4830244..4840505)
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AA seq
893 aa
AA seq
DB search
MGEAVMNLGSQLSGSDPGLDSSSLFHRRIEFHLARKPFNGFINSGKNNNSGGFKLETLNP
NTETRKENGSGKKGGGDVVMESNGMDMEVSFGIAFRKIMRIGAGLQNLGNTCFLNSVLQC
LTYTEPLAAYLESGKHQNSCRMAGFCALCAIQKHVSRALQATGKILAPKDLVSNLRCISR
NFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGHLRSRVQCMQC
KFCSDKFDPFLDLSLEIHKADSLLKALDHFTARELLDGGQRQYQCQQCKQKVKANKRLTI
DKAPHVLTVHLKRFGSHVPGQKIDKKIHYGPTLDLKNFVSDTYGGEMKYTLYGVLVHAGW
STHSGHYYCFVRTSSGNWYSLDDNQVVQVSERKVLEQKAYMLFYVRDRKSPVPKKSVNVA
RNDNVITDAIGSKIYSNHSQRFKDTVQNGFHVNNVDSFSGAKDQRGTLSAEVSKERTSTN
GLVPPKVNGVVVNGQPENLSKVPETGDKAKESVVDPKGGPCIKANPTVPVSNGIHKLEIK
GETRCVDSTPLSNGNVNVKELTNDKDPSTSEKLLSIDLHKQEESSKASTNSQVVKDISNG
SLGDSAVKVNNDAGQSKAVAESARAVSQPTITGLTEKEAVDKTCLKAKRKSLKSRVTKMN
LSFMILDPALGLKRKKKPKRMKHKLGKRKRSSPSSLDESLSSDLGPSTSKLSHTLIPFPM
PSQKKKSKFGSNEKASTLDTKTATVDDVRVVNNGTVLANDKQPQKSSSLAPVGNQGGDNR
RSTDAKETKVIATQKGLLNMLTRGLESSVPRWDDVEVPSLNGVEAQNGNCVSIGYIGDEW
DEEYDRGKRKKIRSSKIEFGGPNLFQEIASKKAKVKKARLERSSSANRPFRIL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggcagtaatgaatttgggttcacaattatccgggtcggatccgggtttggat
agttcatcattgtttcatagaaggattgagtttcatttagcaagaaaaccatttaatggt
tttattaacagtgggaaaaataataatagtggggggtttaagcttgaaacactgaacccg
aatactgagacccgtaaagaaaacgggtcggggaagaaaggcggcggtgacgtggtgatg
gaaagtaatgggatggatatggaagtgagctttggtattgcattcagaaaaattatgaga
attggagccggcttgcaaaatcttgggaatacatgcttccttaattcagtgttacagtgt
ctaacatacactgagcctttagcagcatacttggaaagtgggaaacatcaaaattcctgt
cgtatggcgggtttttgtgctttatgtgctatccaaaaacatgtgagtcgtgctttgcag
gcaactgggaaaatactggctccaaaggatcttgtgtcaaacttgcgatgcatatcccgg
aattttcgaaatgccagacaggaggatgcacatgaatacatggtgaatctgcttgagtcg
atgcataaatgttgcttaccttcaggagtgcctagtgaatcccctagtgcttatgagaaa
agtttggttcataagatatttggtgggcatcttcgcagtcgggtgcagtgcatgcagtgt
aaattttgctctgacaagtttgacccatttctggatttaagtctagaaattcacaaggca
gattcactactcaaagcacttgaccatttcactgccagagagctattagatggtggtcag
aggcagtaccaatgtcagcagtgcaaacagaaagtgaaggctaacaagcggctgacgatt
gacaaggcacctcatgtcctaaccgtccacttgaagcgatttggttcacatgtccctggg
caaaagattgataaaaagattcattatgggcctactttggacttgaaaaattttgtatcc
gatacctatggtggtgaaatgaagtacactctctatggtgtgctggttcatgctggttgg
agcacccattctggtcattattattgctttgttcgcacttcaagtggaaattggtactcc
cttgatgacaatcaggtggttcaagtgagtgagagaaaagtgttggagcagaaggcatat
atgttgttctatgttcgggataggaaatctcctgtgcctaagaagtcggtaaatgttgcc
cgcaatgataatgtgattactgatgccataggaagcaaaatatattctaatcacagccag
agatttaaggatactgttcaaaatggatttcatgtgaataatgtggattccttttctggt
gcaaaagatcaaagggggacattaagtgccgaagtttcaaaggagagaacttcaacaaat
ggtctggtacccccaaaggtcaatggtgtagtagttaatggacagccagaaaatctgtcg
aaagtgccagaaacaggtgacaaagcaaaggagtctgttgtagacccgaagggtggacca
tgcattaaagctaatccaacagttcctgtttccaatggaattcataaacttgaaatcaag
ggggaaacaagatgcgtagactctaccccactatctaatggcaatgtcaacgtcaaagag
ttgactaatgacaaagatccaagtacttctgaaaaactgttgagcatagatctccacaaa
caagaggaaagcagcaaggcaagcaccaactctcaagtggtaaaagacatctccaatgga
agtttaggtgattcagctgttaaagtcaataatgatgctggacagagcaaagcagttgct
gaatcggccagagcagtgagccaaccaactataactggcttgacggaaaaggaagctgtt
gacaagacctgcttgaaagccaaaaggaagtctctcaagagtcgtgttaccaagatgaat
ctcagctttatgatcttagatccagccttaggactgaaaaggaagaaaaaacccaaacga
atgaaacataaacttggaaagagaaagcgtagcagtcccagttccttggatgagagtctc
tcttctgatcttggtccatctacatccaagttatcccatactttgatcccttttccaatg
ccttctcaaaaaaagaaatcaaaatttggttccaatgagaaagcttccactttagataca
aaaactgctacagttgatgatgtgagggttgtgaacaatggcactgtattagcaaatgac
aagcaaccacaaaaaagttctagcttggcacccgtaggaaatcaaggtggtgacaataga
cggtcaacggatgctaaagagactaaagtaattgcaacacagaaaggtctgttgaacatg
cttacgagaggtttggagtcgagcgttccacgttgggatgacgtggaagttccttccttg
aatggtgttgaagcacagaatgggaattgtgtcagcattgggtacattggagatgagtgg
gatgaggaatatgacagaggtaagaggaagaagattaggagctccaaaattgaatttggt
ggaccaaaccttttccaagaaattgcaagcaaaaaggcaaaggtaaagaaagcgaggcta
gagcgttctagctctgcaaaccggcctttcaggatattataa
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