Lycium barbarum (goji berry): 132603103
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Entry
132603103 CDS
T09483
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00531
Glycosaminoglycan degradation
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
132603103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lbb00536
]
132603103
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
132603103
Glycosaminoglycan binding proteins [BR:
lbb00536
]
Heparan sulfate / Heparin
Enzymes
132603103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
132603103
NCBI-ProteinID:
XP_060171980
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Position
7:11029993..11035515
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AA seq
540 aa
AA seq
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MGSLFLQKGVLVWIFLFSLRFICGYSEVERVSGTVFIDGKNAIGKIDRHFICATLDWWPP
EKCDYGTCAWDHTSFLNLDLNNIIFLNAIKAFSPLKIRLGGTLQDKVIYQTEDHKQPCVS
FVRNTTEMFGFTPGCLPLSRWDELNAFFNKSGANIIFGLNALYGRSVHSDGLSVGAWDPS
NAESLIRYTVKKGYDIHGWELGNELSGSGVGTRVAANQYASDTISLYKIVQDAYKNSETK
PLVLAPGGFFDEGWFKELVNKAGKSFDVATHHIYNLGPGRDEHLIEKILDPSYLDGEANT
FSKLQNVLKTSDSSVVAWVGEAGGAYNSGRNHVTNAFAFSFWYLDQLGMSAAYDTKTYCR
QTLIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTSFSGTKKIRAYAHCAKESQGI
TLLLINLDGKTTIHAKVDFNGTMLHRRKHIHHHSHRKSSIKLPKGSKIASNTREEYHLTA
KDGDLQSQTMLLNGNALTIDSSGNIPSLEPIFVNSTEPISVGPFSIVFVHLPYVLLPSCS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttatttttgcaaaagggtgtgttggtatggatttttttgtttagtttgaga
ttcatttgtggatactcagaggttgaaagagtgagtggaactgtgtttatagatggaaaa
aatgccattggaaaaatagatagacattttatttgtgctactttggattggtggccacct
gagaaatgtgattatggaacttgtgcttgggaccatacttctttcctaaatctggatctt
aacaacattatttttctcaatgctataaaagccttctcgccattaaagattcggttgggt
ggaactttgcaagacaaagtcatataccaaactgaagatcataaacagccttgtgtctca
tttgttagaaacacaacagagatgtttggttttactccagggtgccttcccttgtctaga
tgggatgaactcaatgcattctttaataagtctggggctaatatcatctttggattgaat
gctctctatggaagatctgtacactctgatggtttatccgtcggagcttgggatccaagc
aatgctgaatcgcttatacgttatactgtcaaaaaaggatatgatatccatggttgggaa
ctcgggaatgaattgagtggaagtggagttggaaccagagttgcagcaaatcaatatgca
tctgatacaatttccttgtacaaaatagtgcaagatgcttacaagaattccgaaactaaa
ccattggtcctcgcaccaggaggtttctttgatgaaggctggttcaaggaattagtaaat
aaagccgggaaatcatttgatgtggccactcaccacatatataacctcggtccaggaaga
gatgaacaccttattgaaaaaatcctcgatccatcttatcttgatggagaggctaacaca
ttcagcaaacttcagaatgtcctaaagacctctgacagttcagtagttgcctgggttggt
gaggctggaggggcttacaacagcggccgcaaccatgtcacaaatgcctttgcttttagc
ttctggtatttggaccagcttgggatgtcggctgcctatgataccaagacatactgtcga
caaacactgattggtggaaactatggtttactcaatacaactacctttgtaccaaatcca
gattactacagtgctcttctttggcaccgattgatgggaaggaacgttttatcaacaagt
ttctcagggacaaagaaaatacgcgcctacgctcattgtgctaaggaatctcaaggtatc
accttattgttgatcaaccttgatgggaaaactaccatccatgccaaagttgattttaac
ggtactatgttacatcggcgaaagcacatacatcatcatagccacagaaagagttcaatt
aagctacctaaaggtagcaaaatagcatcaaatacaagagaagaataccatttaacagca
aaagatggagatttacaaagccagacaatgctgctaaatggaaatgcactaactatagat
tcatctgggaatataccttcattggagcctatatttgtcaattcaacagagccgatatcg
gttgggccattctctattgtatttgtacacttaccatatgttcttttgccttcttgtagc
tga
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