Lycium barbarum (goji berry): 132603405
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Entry
132603405 CDS
T09483
Name
(RefSeq) protein argonaute 4-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132603405
03036 Chromosome and associated proteins [BR:
lbb03036
]
132603405
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132603405
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132603405
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
132603405
microRNA pathway
RISC loading complex
132603405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
132603405
NCBI-ProteinID:
XP_060172435
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Position
1:162546746..162556946
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AA seq
923 aa
AA seq
DB search
MGFVVVEKIVVMAEEHNGGSIEALPPPPPVPPDFSPAKAEPEPVKKKVLCVPMARRGLGT
KGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELA
GKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDVTSNRNNGSNGNTSPNRNGSPNETDRKRL
RRPYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVR
QSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQ
NAKDPFSLDWAKAKRVLKNLRVKTAPANQEYKITGLSEKPCREQMFTLKQRSKDADGEVQ
TSEVTVYDYFVNHRNIDLRYSADLPCINVGKPKRPTYFPVELCTLVSLQRYTKALSTFQR
ASLVEKSRQKPQERMQILSNALKINNYDAEPLLRSCGVSISSNFTQVEGRVLPAPKLKAG
NGDDLFTRNGRWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRIGEMKGISVEPP
FDVFEESPQLRRAPPVVRVDKMFEEVQSKLPGAPKFLLCLLPERKNCVIYGPWKRKNLAD
YGIVTQCLAPGRVNDNYLTNLLLKINAKLGGLNSVLAFELSSTIPMVSKVPTIILGMDVS
HGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNLFKKVSDTEDDGIMREL
LLDFYVSSGKRKPEHIIVFRDGVSESQFNQVLNIELDQLIEACKFLDEKWSPKFVIIVAQ
KNHHTKFFQAGSPDNVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGF
SPDELQDLVHNLSYVYQRSTTAISIVAPVSYAHLAATQVGQWMKFEDASETSSGKDGITN
AGPVTVPQLPRLNENVSSSMFFC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggggtttgtggtggttgaaaagatcgtggtgatggctgaagaacataatggcggatcc
atagaggctctgcctcctccgccgcctgttccgcctgatttctctccagcaaaagcagag
ccagagccggtgaagaagaaggttttatgcgttcccatggctaggcgtggccttggaacc
aaggggcaaaagattccgatccttactaatcactttaaagtgaacgtgtctaatgttgac
gggcacttctttcattacagtgttgccctattttatgaggatggtcgacctgtcgaagga
aaaggaattggcagaaaagttctggatagagtgcacgaaacatatgataccgaattggct
gggaaggattttgcatacgatggggagaaaagcttgttcaccattggttcgctacctaga
aataaattagagttcacggtggtcctagatgacgtaacatctaacaggaacaacggaagc
aatggaaacacaagccctaataggaatggaagtccaaatgaaactgataggaaaagatta
aggaggccataccaatcaaaaacttataaggtggagattagcttcgctgccaagattcca
atgcaggcaattgcaaatgctttgcggggtcaagagtctgagaactctcaagaagccttg
agagttttggatatcattttaaggcagcatgcggcaaaacagggctgtttacttgttcgt
cagtccttttttcacaatgacccaaagaattttgccgatgttggaggtggtgttcttggc
tgccgagggttccactcgagttttcggaccacccagtctggattgtctttgaacattgac
gtgtcgaccacgatgatcatccagcccgggcctgtggttgattttttgatagcgaaccaa
aatgcaaaagatcccttttcacttgattgggcgaaggcaaaacgtgtgctgaagaatctg
agggtgaagactgctccagctaaccaagagtacaaaataactggattgagtgaaaaacct
tgtcgtgagcagatgtttactctaaagcagaggagcaaagatgcggatggtgaagtgcaa
acatcagaagtgacagtttatgattactttgttaatcatcgtaacatagacttgcgatat
tccgctgatttgccgtgtattaatgtgggaaagcccaaacgtcccacctatttccccgtt
gagctatgcactttggtctcgttgcaaaggtacacaaaagcattgtccacctttcagagg
gcttccttggtggagaagtctaggcaaaagccacaggagagaatgcaaattttgagcaat
gctctcaaaatcaacaattatgatgctgagcctctgcttcgttcttgcggcgtctcgatc
agtagcaacttcacccaggttgaagggcgtgttctgcctgcgcctaagctgaaggcagga
aatggagatgaccttttcacacgaaatggcaggtggaattttaataataagagattcttt
gaaccagcaaaggtagagcgttgggctgttgtcaacttttctgcacgctgtgatgtccgt
ggcctagtcagagatttgacaagaattggggagatgaaaggaattagtgtggaacctccc
tttgatgtgtttgaagagtctccacaacttagaagggctccacctgtcgtcagagttgat
aaaatgtttgaagaggtccaatcaaaacttcctggtgccccaaaatttcttctctgtctt
cttcctgagaggaaaaattgtgtcatatatggaccatggaagcggaaaaatctggccgat
tatggtatagtaacccaatgcttggctcctggaagagtcaatgataattatctcacaaac
cttctacttaagatcaatgcaaagcttggtggtttaaattctgtgttagcttttgagctt
tcttctaccatccccatggtatctaaggttcccaccataattcttggaatggacgtgtca
catggttcccccggccaatctgatgtcccatcaattgctgcagttgtgagttcaaggcag
tggccttcaatatctcgttatagagcttctgtgcgcactcaatctcctaaagtggagatg
attgataacctatttaaaaaagtttcagacaccgaggatgatgggattatgagggaactt
ttgctagatttttatgtgagttcagggaagaggaagcctgagcatatcatagtattcagg
gatggtgtcagcgaatcacaatttaatcaagttctaaacattgagctggaccagctcatt
gaggcctgcaagtttctagatgaaaagtggtcgccgaagtttgtgatcattgttgcccag
aaaaatcatcatacaaaatttttccaggctggatctcctgataatgttcctcctgggaca
atcattgacaacaaagtttgtcacccaaggaactacgacttctatctgtgtgcccatgcg
ggcatgattggtaccacaagacctacacattaccatgtgttgttggatgaagttggtttc
tcacctgatgaacttcaagaccttgttcataatctgtcctatgtgtatcagagaagcact
actgctatatccattgtggctccggtaagttatgcccatttagcggccacacaggttgga
caatggatgaaattcgaggatgcatcagagacatcatcaggcaaggatggtataacaaat
gctggtccagtaacagttcctcagttgccccggcttaatgagaatgtttctagttccatg
ttcttctgttaa
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