KEGG   Lycium barbarum (goji berry): 132603605
Entry
132603605         CDS       T09483                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03018  RNA degradation
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132603605
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132603605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132603605
   03041 Spliceosome [BR:lbb03041]
    132603605
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     132603605
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     132603605
Spliceosome [BR:lbb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    132603605
SSDB
Motif
Pfam: LSM DUF3294
Other DBs
NCBI-GeneID: 132603605
NCBI-ProteinID: XP_060172720
LinkDB
Position
1:complement(162975500..162979925)
AA seq 98 aa
MSTGLGLESLVDQQISVITNDGRNIVGILRGFDQATNLILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDANLDMSKLRAHPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcaactggacttgggcttgagtctcttgttgatcaacaaatctcagttattacaaat
gatggacggaatattgtgggaattttgagaggatttgaccaggctacaaacttgattctt
gatgaatcacatgaaagagtatattcaacaaaggaaggtgtgcagcaacttgtgttgggt
ctttatattataaggggggacaacataagcgtcgttggggaattagatgaagagctggat
gccaacttggatatgtcaaaactgagagcacaccctctaaagccagtcgttcactga

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