Lycium barbarum (goji berry): 132603605
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Entry
132603605 CDS
T09483
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132603605
09123 Folding, sorting and degradation
03018 RNA degradation
132603605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132603605
03041 Spliceosome [BR:
lbb03041
]
132603605
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132603605
mRNA degradation factors
5'-3' decay
Lsm complex
132603605
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132603605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF3294
Motif
Other DBs
NCBI-GeneID:
132603605
NCBI-ProteinID:
XP_060172720
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Position
1:complement(162975500..162979925)
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AA seq
98 aa
AA seq
DB search
MSTGLGLESLVDQQISVITNDGRNIVGILRGFDQATNLILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDANLDMSKLRAHPLKPVVH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggacttgggcttgagtctcttgttgatcaacaaatctcagttattacaaat
gatggacggaatattgtgggaattttgagaggatttgaccaggctacaaacttgattctt
gatgaatcacatgaaagagtatattcaacaaaggaaggtgtgcagcaacttgtgttgggt
ctttatattataaggggggacaacataagcgtcgttggggaattagatgaagagctggat
gccaacttggatatgtcaaaactgagagcacaccctctaaagccagtcgttcactga
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