Lycium barbarum (goji berry): 132603670
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Entry
132603670 CDS
T09483
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbb03036
]
132603670
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lbb00535
]
132603670
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132603670
Meiosis-specific proteins
Cohesin complex and associated proteins
132603670
Proteoglycans [BR:
lbb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
132603670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
132603670
NCBI-ProteinID:
XP_060172796
LinkDB
All DBs
Position
1:163083898..163102675
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AA seq
1231 aa
AA seq
DB search
MYIKQVIIEGYKSYKEQVATEDFSPRVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQALLHEGAGHSVLSAFVEIVFDNSDNRMPVDKEEVRLRRTVGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARNKIAENSTKKYESVLEAHEKSKELEKLSKDLIKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLREKMSMNIKAKEDAQKQLSLLEDEIKDTKDALNEIKPLHEKQVKEEED
ITRGIMDREKRLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNLTQERKLKDEI
DQLKKDMKDQDDIIQRRKVEVGKKESFISGYRNAYNQYKVERDKLHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLECDDKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKTPHVNYPQGSDVISL
LKKLRFSDSYRRAFEQVFARTVICRNLDVATRVARNDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLRFMSTIKQNTVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAGLGHDKS
ELEQLKQDIGNAERQRQSILKALQKKEKLLGNILSQIDQLRANIAMKQEEMGTDLVDHLT
PEERDSLSRLNPEITDLKKELIACRANRIETETRKEELEMNLSTNLERRKQELVAVNSSV
DIEMLKGEVESKNQELKDADSLVDHVTKELKRVSGSIDERNKKLMEIKEEKDKLKAVEDV
YQNELQDEARELEQLLSKRNTYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEDDDNDPDDDEPRADAEGRIEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
SILELNYFLHSSSLYCLHVYLLVSFDCNLLDMVRDLADRGSTQFITTTFRPELVKVADKI
YGVTHKNRVSRVNVVTREQALDFIEHDQSHS
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcataattgaagggtataagagttataaggaacaagtagccact
gaagatttcagtccgagagttaactgtgttgttggtgcaaatggatctggcaaatctaac
tttttccatgcaatccgttttgttgtaagcgacctctttcataacctgcgcagtgaagaa
aggcaggctttgcttcatgaaggagcaggtcactcagtattatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtgcggctgagaaga
acagtcggtctcaagaaggatgagtatttcttggatggaaagcatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttctctcgttctaatccctattatgttgtgcag
cagggaaagatagcatcattgacgttaatgaaagattcagaacgacttgatctgctgaag
gaaattggagggacacgcgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaaacaaattattcaagttgtacaatacttggacgagagattg
aatgagcttgaacaagagaaggaggaactgaaaaaatatcaacagcttgacaagcagcgt
aaatctctggaatacacgatttttgacaaagaacttcatgacgcacgccaaaaattgaat
gaggttgaagaggctcggaacaaaattgctgagaactctactaagaagtatgaaagtgta
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgataaaagaa
attcaaattttaagcaaggagaaagaagcagtagagaaacagcggacagaggctatcaga
aagcgagccaagcttgatcttgattacaaagatcttcgagagaagatgtctatgaatatt
aaagctaaagaggatgcacagaaacaactctctcttctagaagatgaaattaaggacaca
aaagatgcactcaatgaaatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagagggattatggatcgtgaaaagagacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcaagcaaagctgctcgggacaaatggctccagaaagaaattgat
gaatatgaacgcgttttatcttcaaacttaacgcaggagagaaagcttaaagatgaaatt
gatcagctcaagaaagacatgaaagatcaagatgatataatccaacgtcgtaaagttgaa
gtgggcaaaaaagaatccttcatatctggttatcgaaatgcttataatcagtataaagtg
gagagagacaagctgcatgatgagcggaagtctctgtggacacaggagactgagctcact
actgaaattgaacggctcaaggctgaagttgtgaaggcagagaaaagcctagatcatgca
actcctggtgatatcagaaggggtctgaattctgtaaggaggatttgcagagagtatgaa
atttctggagtatttggcccaatttttgagttgctcgaatgtgatgataagttttttaca
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tccactaaaattattagacacctcaatgcacaaaaaggtggacgagtcacatttattcca
ttgaacagggttaaaactccacatgttaattatccacagggctctgatgtgatttcgctt
ctgaagaaattgaggttttctgattcatatcgcagggcatttgagcaggtgtttgcaaga
actgtaatttgtcgaaatctggacgttgctaccagagttgctcgtaatgatgggcttgac
tgtattactctggaaggtgaccaagtaagtaaaaaaggtggcatgactggtggattttat
gatcataggcgctcaaaactgaggtttatgagcaccatcaaacagaatacagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctggcttgggtcatgacaagtct
gagttagaacagcttaaacaagacattggtaatgctgagagacagagacagtccatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattttgagtcaaatagatcagctc
agagctaatatagctatgaaacaagaagaaatgggaacagaccttgttgatcatttaaca
ccggaagagcgagattctttgtcacgtttgaaccctgaaatcacggatctgaagaaggag
ctgattgcatgcagggctaatcggatagagactgaaactagaaaagaggagcttgagatg
aacctgtcaacaaatcttgaaagacgaaaacaagagttagtggcggtgaattcttctgtc
gacattgaaatgctaaagggtgaagttgagagcaagaatcaggaacttaaggatgcagac
tcactagttgaccatgtgaccaaagagcttaaaagggtttctggaagtatagatgaacga
aacaagaagctgatggagatcaaagaggaaaaggataaactgaaggctgttgaagatgtg
tatcagaatgaacttcaggatgaagcaagagaattggaacagctactaagtaaacggaac
acctatcttgccaagcaagaagaatactcaaagaaaatccgggaattgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaatgtaaaagaattatataagatgctgcac
aagtgtaatgagcagctgcaacaatttagccatgtaaacaaaaaggcacttgatcaatat
gtaaatttcaccgagcaaagagaagaactccaaagaaggcaagctgaactggatgctgga
gatgagaaaatcaaggagcttatatctgttttggatatgagaaaggatgaatcaattgag
cgcacgttcaagggtgtggctaaacatttccgtgaagtattctcacaacttgtgcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggatgatgacaatgatcct
gatgatgatgagccgcgtgctgatgcggagggaaggattgagaaatatattggcgtgaaa
gtgaaggtgtctttcactggacaaggagaaacacagtcaatgaaacagttatcagggggc
cagaaaactgtggtagcgctggcacttatatttgccatacagagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcagtacagaacagctgttggg
agtatcctagagttgaattatttcctgcattcctcctctctctactgtctccatgtatat
ctccttgtttcctttgactgtaatttgctagatatggttcgtgatttggcagacaggggt
agcacacaatttatcactacgacatttcgcccggaacttgtgaaagtggctgataagata
tacggcgtgacacacaaaaatagagttagccgtgtcaatgttgtgaccagggaacaagcc
ttagattttattgaacatgatcaatcacatagctga
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