Lycium barbarum (goji berry): 132603787
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Entry
132603787 CDS
T09483
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132603787
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132603787
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132603787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_6
zf-RING_Vps41
CC_Bre1
DUF4302
zf-Nse
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
132603787
NCBI-ProteinID:
XP_060172998
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All DBs
Position
1:163234226..163240715
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AA seq
387 aa
AA seq
DB search
MEKKLNSRMEEGKMSEDILTSAAAFVEGGIQDACDDACSICLEEFSDSDPSTVTGCKHEF
HLQCILEWCQRSSQCPMCWQPLSLKDTNSQELLDAVEHERNIRMNPPRNTTIFHHPTLGD
FELQHLPASATDSELEERIIQHLAAAAAMGRTRHLARREGPRGRSSAQGRPHFLVFSTHP
NAPSPAGASSSTRRSGGEPTPEVLVSGQNSAIVSGQPVTQPSSFQADQVPASGSGSNVAV
NQLGTSSNNRTPPPQSSPNNQDRAGPSDFQSFSESIKSRLSAMSMRYKESLTKSSRGWKE
KFFSRNSSTTDHCAESRSEVSAAVATVSNLMEHVETTDSRASSAESNIPEDTLPVGLAEQ
HIPVIGDTHSLNEDNRQTPCAASSGSN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaacttaactcaagaatggaggaaggcaagatgtctgaggatattttaact
tcggctgcagcatttgtggaaggtggaattcaggatgcctgcgatgatgcttgcagcata
tgccttgaagagttttctgatagtgatccttctactgtgactggttgcaagcatgagttc
catcttcagtgtattcttgaatggtgtcagagaagctcccagtgccccatgtgttggcag
cctctcagcttgaaagacactaacagccaggaattgctggatgcagtagagcacgagcga
aacatcaggatgaatcctcctagaaacaccacaatctttcaccatccgactttaggagat
tttgaattgcagcatttaccggcaagtgcaactgattctgagcttgaagagcgtatcatt
cagcacttagctgctgccgctgccatgggaaggacacgccaccttgccagaagggaaggt
ccgcgaggtaggtcatcagctcaaggccgtccccattttctggtgttttcaactcatcca
aatgctccttctcctgctggtgcttcatcttctactcggaggagtgggggtgaacccact
cctgaagtcttggtatctggtcagaattctgcaattgtttctggacaaccagttactcaa
ccatcttcttttcaagctgatcaggttcctgcctctgggtcaggatcaaatgttgctgtt
aatcagcttgggacgtcctcaaacaataggactcctcctcctcaatcttctcctaacaat
caagacagagctggaccatcagattttcagtcgttttcagaatctataaagtctcgactt
agtgcaatgtcaatgagatacaaagaatctttaacgaagagttcaaggggttggaaagag
aaatttttctctcgtaatagttcaacaacagatcattgtgccgaatctaggagtgaagtc
agtgccgctgttgccactgtatcaaacctaatggagcatgtggaaacaacagatagcaga
gccagttctgctgaatcaaatataccggaggatactttacctgtcggacttgctgagcag
catatacctgtgattggtgatacccattctttaaatgaggataataggcaaaccccatgt
gctgcaagttctggttcgaactaa
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