Lycium barbarum (goji berry): 132603891
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Entry
132603891 CDS
T09483
Name
(RefSeq) protein GIGANTEA-like isoform X1
KO
K12124
GIGANTEA
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132603891
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Gene cluster
GFIT
Motif
Pfam:
Dimerisation
Motif
Other DBs
NCBI-GeneID:
132603891
NCBI-ProteinID:
XP_060173172
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Position
7:114968568..114979775
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AA seq
1172 aa
AA seq
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MAAASASERWIDGLHFSSLFWPPPQDVQQRKAQIAAYVKYFGQFTSEQFPEDIAELIRNR
YPSKENRLFDDVLATFVLHHPEHGHAVVHPIISCIIDGTLEYDKSSPPFSSFISLVSPSS
EKEYSEQWALACGEILRILTHYNRPIFKVDRQENGADRSTSGSHTSTSKSANSEPGVPSM
QHERKPLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGELKPPSSAASRGSGKHP
QLLPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTPMDEHLVAGLP
ALEPYARLFHRYYAIASPSATQRLLVGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGL
RLPRNWMHLHFLRAIGIAMSMRAGIAADSAAALLFRVLSQPALLFPPLRQVEGVEVPHEP
LAGGISCNKKQREVPAVEATVEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSA
VDLPEIVVSTPLQPPVLSWNLYIPLLKVLEYLPRGSPSETCLMKIFVATVEAILQRTFPP
DSSREEIRKTRYVFGSAFKNLAVAELRTMVHSLFLESCASVELSSRLLFVILTVCVSHEA
KPNGNKRAKGEDSHPLSEIGVDTLATIGKRRQIGSKKVKKQGPIAAFDSYVLAAVVALSC
ELQLFTLISRGTNHPDPKIIMDEAKPANDSSNELRNGIHSAVCHTRRILSILEALFSLKP
SSVGTSWSYSSNEIVAAAMVAAHISDLFRRSKACMQALSILIRCKWDSEIHSRASSLYNL
IDIHSKTVASIVDKAEPLEAYLIQAPVLKERPRCLNGKKHYKYTSRNCLTSEKPSEPQCK
DSYDCKASLVCEKASDSSSHSSEVAGCPISKVFANFSLDASDLANFLTKDRHIGFNCNAQ
DLLKSVLAEKQELCFSVVSLLWHKLIASPETQPSPESTSAQQGWRQVVDALCNVVSASPG
KAATAIVLQAERELQPWIAKDDDLGQKMWRINQRIVKLIAELIRNHDIAESLVILASNPD
LLLRATDGMLVDGEACTLPQLELLEVTARAIQPVLDWGESGQSVADGLTNLLKCRLPATV
RCVSHPSAHVRALSTSVLRDIMYAGSVKPSAKQADLNGIHNPAYQYLSISIIDWKADIEK
CLMWEANSRLENGMSAQFLDTAARELGCTISI
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcttctgcaagcgaaaggtggattgatggtcttcatttctcctcattattt
tggcctcccccacaagatgtacagcagcgaaaggctcaaattgctgcgtatgttaagtac
tttggtcagttcacatcagaacaatttcctgaagatatagctgagctcatacggaaccgg
tatccatcaaaggagaaccgactttttgatgatgttttagcaacttttgttcttcatcac
ccagagcatgggcatgctgtagttcatccaattatttcatgcatcattgatggcacactg
gagtatgataaaagtagtccgcctttttcttcctttatatcattggtttccccaagcagt
gagaaggaatattctgaacaatgggctcttgcatgtggagagattttacgaatcctaaca
cactacaaccgcccaattttcaaagttgatcgtcaggaaaatggagcagatagaagcacc
agcggaagccacacttcaacaagtaaatctgccaatagtgaacctggtgtgccttctatg
caacatgagagaaaacccctgagaccattgtctccatggatcactgatatattgcttgct
gcacccctagggattagaagcgattacttccgttggtgtggcggtgttatgggaaagtat
gctgctggagaactcaagcccccatcaagtgctgcttctcgtggttctgggaagcatccg
caactactgccttcaactccaaggtgggctgttgctaatggtgccggtgttattttaagt
gtttgtgatgaggaagttgctcgctacgagactgctaccttgactgcagccgctgttcct
gcacttctgcttccacctccgacgacacctatggatgagcatctcgttgcaggactacca
gcacttgagccatatgcacgtttatttcatcgatattatgcaattgctagtccaagtgcc
acccagaggcttcttgttggacttttggaagctccaccatcttgggctccggatgcactt
gatgctgcggtacaactagtggaacttctgcgagcagctgaagattatgcatctggattg
cgtcttcctaggaactggatgcatttgcatttcttgcgtgcgattggaattgccatgtcc
atgagagcaggaatagctgcagattctgcagcggctttacttttccgagtactttctcaa
cctgctttgctttttcctcccttaaggcaagttgaaggagttgaagttccacatgaacct
ctggctggtggcatttcatgtaataaaaagcagagagaagtgcccgctgtagaagccaca
gtagaagccactgcccaagggattgcatcaatgctttgtgcacatggtccagaggttgaa
tggagaatatgtaccatctgggaagctgcctatggcttgattcctttaagttcatctgca
gttgatctccctgagattgtagtttctacccctctacaaccacccgttttgtcatggaac
ctgtatataccccttcttaaggttctagagtatcttcctcgtgggagtccatctgaaact
tgtctcatgaaaatatttgtagcaaccgttgaagcaattcttcagagaacattcccgcct
gattcctctagagaagaaatcagaaaaaccagatatgttttcggctctgccttcaaaaat
cttgctgtggcagaactgcgaactatggttcattcattattcttggagtcatgtgcctct
gttgagctttcttctcgacttctttttgttatcttaacagtatgtgttagtcatgaagca
aaaccaaacgggaataaaagggccaaaggtgaagattctcacccacttagtgaaataggg
gtagacacgctggcaaccataggaaaacggagacagataggaagtaagaaagtgaaaaaa
caaggacctattgcagcgtttgattcttacgttcttgctgctgtcgttgctctttcttgc
gaacttcagctcttcactttgatttcaagagggactaatcatccagatccaaaaatcatc
atggatgaagcaaagcctgcaaatgattcatctaatgagctaagaaacgggattcattct
gccgtctgtcatactcggaggatattgtcaattttagaggcacttttttctctgaaacca
tcgtctgttggaacctcatggagctacagctcaaatgagatagttgctgcagctatggta
gctgctcatatttctgatctgtttagacggtccaaggcctgcatgcaggctctttctatc
ttgatacggtgtaagtgggatagtgaaattcattccagggcatcatcactttataaccta
attgatattcatagcaaaactgtcgcatcaattgttgacaaggctgaaccattggaagct
tatctaatacaagcaccagtcctgaaggagcggcccagatgcttaaatgggaagaaacat
tataaatacaccagtcgtaactgcttaacatcagaaaagccatcagagcctcagtgtaaa
gactcctatgattgtaaagcttcacttgtgtgtgagaaagcttcagactcaagttcacac
tcaagtgaggttgctgggtgccccatcagcaaagtgtttgcaaatttctccttggatgct
tcagatttggccaattttctgacaaaggacaggcatataggatttaattgcaatgcccaa
gatctgttaaaatcagtacttgcggagaaacaagaattatgtttttctgttgtctcattg
ctctggcacaagttgattgcatcacctgaaacacaacccagtccagaaagcacttctgcc
cagcaaggatggagacaggtggtggatgcactatgcaacgttgtatcagcgtcccctgga
aaagctgcaacagccattgttcttcaggctgagagggaattgcaaccatggattgctaaa
gatgatgatcttggtcagaaaatgtggagaattaaccaacgtatagtaaaattgatcgca
gaactgataaggaatcatgatatagcagaatctctggtaattctggctagtaacccagac
ctccttttacgggccacagatgggatgcttgtcgatggagaagcatgcaccttaccacag
ttggagctcttggaagtgacagctagagcaattcaaccagtgcttgactggggagaatct
ggacagtcagttgctgatggcctcacaaacctattgaagtgtcgcttaccagccacagtt
cgctgtgtttctcatccaagtgcgcacgtccgtgctctcagtacatcggttcttcgtgac
attatgtatgctggttcagtgaaaccaagtgctaaacaagcagatttaaatggtattcac
aatcctgcttatcagtacctaagcataagcatcattgactggaaagcggatattgagaaa
tgtttgatgtgggaagctaatagccggcttgaaaacggaatgtctgctcaatttcttgac
actgctgctagggaattaggctgtactatatcaatctga
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