Lycium barbarum (goji berry): 132603960
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Entry
132603960 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132603960
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
132603960
NCBI-ProteinID:
XP_060173246
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Position
7:117428880..117434001
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AA seq
644 aa
AA seq
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MSSGGSTIVWFRRDLRLEDNPALAAGVRAGQVIAVFIWAPEEEGYYCPGRVSRWWIKQSL
AHLDSSLKKLGTSLITKRSTDSISSLLDVVKSTGATRVFFNHLYDPISLVRDNRAKETLS
AEGVSVRSFNADLLYEPWEVVDDVDRPFNTFSDFWDRCLTMPYDPEAPLLPPKRIISGDA
SRCSSDNVVFESESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRKKADSATT
SFLSPCLHFGEVSVRKVFHRIRTKQTLWANEGNKAGEESVNLFLKSIGLREFSRYMSFYH
PYTHERPLLGHLKYFPWLVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FSVKVLQLPWTWGMKYFWDTLLDADLESDALGWQFITGTLPDGCEFLGIDNPQFEGYNID
PNGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGIELGSNYPLPIVEIDAAKERLEEA
LSQMWQLEAASRAAIENGMDEGHGDSTEFVPIAFPQAMQMEMEREVPVRNNPIRRYEDQI
VPSMSSSFFRTEDEETSVDIRNSVVDSRAEVPXYRCKSRTNERSTLDQGIKQAVGSNTSL
HFNFVVSSRNFEDSTAESLSSSPRDGGVGPDSFMAKTVGLNQYS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggtggttctactatagtatggtttaggagggatctaaggttggaagataat
cctgcacttgctgctggagttagagcaggacaagtaattgcagtgtttatatgggcacct
gaagaagaaggatattactgtcctggaagggtgtcaagatggtggattaagcaaagtttg
gctcatcttgattcctctttgaagaaacttggcacttccctcattacaaagagatctact
gatagtatttcttctcttcttgatgttgtgaaatctactggtgcaactagagtctttttc
aatcatttgtatgatccaatatcacttgtcagggataatcgcgcaaaggaaaccttatca
gctgaaggtgtatctgtgcgttccttcaatgctgacttgctatatgaaccatgggaagtc
gtcgatgatgtagatcgcccattcaacacattttctgatttctgggacagatgccttacc
atgccttatgatcctgaagctccacttcttccacctaaaaggataatatctggtgatgca
tcaagatgttcttcagacaacgtggtgtttgagagtgaatcagagaaaggaagcaatgcg
cttcttgctcgagcgtggtcccctggttggagtaatgctgataaagcattaactactttc
attaacggaccattaatcgagtactccaagaaccgtaagaaagctgatagtgcaacaacc
tcatttctgtcaccgtgtttacattttggtgaagtcagtgttcgtaaggtattccatcgt
attcgtaccaagcaaactctgtgggccaatgaaggaaacaaagcaggtgaagagagtgtc
aacctgttcctcaagtccattggccttagggagttctcaagatacatgagcttttatcat
ccttacactcatgaaaggccattgcttggtcacctgaagtactttccttggttagtagac
gagggttattttaaggcgtggaggcaaggtagaacaggttatcctttggttgatgcaggt
atgagagagctttgggccactggctggctacacgatcgcattcgagttgttgtgtctagt
ttttctgttaaggttctgcagcttccatggacatggggaatgaagtatttctgggacaca
ttgttagatgctgatcttgagagtgatgctcttggttggcagtttattaccggtacctta
cctgatggttgcgagttccttggaattgataatccacagtttgagggatacaatatcgat
cctaatggggaatatgttcggcgatggcttcctgaacttgctaggctgccgactgaatgg
atacaccacccttgggatgcaccagaatctgtacttcaagctgctggcattgagcttggt
tccaattatccgcttcccattgttgaaatcgatgcagcaaaagaaagactagaagaagcg
ctgtcgcaaatgtggcagcttgaagcagcttcaagagctgctattgagaatggaatggac
gaaggacatggagactccactgagtttgtcccaatagcttttcctcaggccatgcagatg
gaaatggaacgtgaagtaccagtcaggaacaatcctattcgacgttatgaagatcagatt
gttcctagcatgtcatcttccttttttagaactgaagatgaagaaacctctgtggatatt
agaaattctgtcgtagatagtagagcggaagttccataatatcgatgtaaatcaagaacc
aacgagagaagtacacttgatcaaggcattaagcaagctgttggaagcaacactagtcta
cattttaattttgtggtaagtagcaggaactttgaagattcaacagcagaatctttaagt
agtagtccgagggatgggggtgtaggtcctgactcctttatggcgaagactgttgggcta
aaccagtactcttaa
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