Lycium barbarum (goji berry): 132604094
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Entry
132604094 CDS
T09483
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132604094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132604094
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132604094
mRNA degradation factors
5'-3' decay
Decapping complex
132604094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
132604094
NCBI-ProteinID:
XP_060173413
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All DBs
Position
1:complement(163923780..163931500)
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AA seq
373 aa
AA seq
DB search
MSSQQQNNGKLMPNLDQNSTKLLNLTVLQRIDPFIEEILITAAHVTLYEFNIDNSQWSRK
DVEGSLFVVKRSSQPRFQFIVMNRRNTDNLVEDLLGDFEYEIQVPYLLYRNSTQEVNGIW
FYNQRECEEVANLFDRILGAYSKVPTKSKVPLTQSEFEELEAIPTMAVIDGPLEPSSSTA
SNAPHLPDDNSFVNFFSNAMTIGNASSTTVQGQLYHSSPAIIPPPRPPASVPPSSTPALV
PSPPLSTASLLRPLFDAPEPDTSAKWSSNLVKPSSFFGPPTVSSPLMPPVSSSVPTAPPL
LPLGNLQRPYGAPLLQPFPPPTPPPSLTPTSAATSNYGPAVSRDKVREALVMLVQDDQFI
DMVYRAVLNAHHS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcaacaacagaacaatggtaaattaatgccgaatctggaccagaacagcaca
aagctcctaaacttaactgttcttcaaaggattgatcctttcattgaagaaatactcatc
actgctgctcatgttaccctctacgaattcaatattgataactcccaatggagtcgaaag
gacgttgaaggatctctatttgttgtcaagaggagttctcaacctcggttccagtttatt
gttatgaaccgcagaaatacagataatttggtggaggatctgttgggggattttgagtat
gagatccaggttccatatttgttgtatcgaaattctacacaagaagttaacgggatatgg
ttttataatcagcgggaatgtgaagaagttgcaaatctctttgacaggatactcggtgca
tattccaaggtgcctaccaagtcaaaagtaccattgacgcagagtgaatttgaagagctg
gaagcaattccaaccatggctgtaattgatggtcctctggagccgtcatcgtctactgcc
tcaaatgctccgcatctccccgatgacaattcctttgtgaacttcttcagtaatgctatg
acaattgggaatgcttctagtactacagttcaagggcagctataccactcatctccagcg
atcatacctcctcctcgtcctcctgcttctgttcctccctcttcaacacctgccctggtt
ccatctcctcctctttcaactgcgtcccttttgaggcccctctttgatgctcctgaacca
gacaccagtgctaaatggtcttcaaatctggtgaagccatcatctttttttggtcctcca
accgtctcttctccgctgatgcctcccgtttcttcatctgtgcccactgctcctccactt
cttccccttgggaatctccagcgtccttatggagctcctttgcttcaaccatttcctcct
cccactcctcctccatctcttactcctacttctgctgctacctcaaactatggacctgct
gttagcagagacaaagtgcgtgaagcacttgtaatgcttgttcaggacgaccaattcata
gacatggtataccgggcagtgctgaatgctcatcattcataa
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